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scnpilot_solids2_trim150_scaffold_3698_curated_4

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(3786..5816)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Segetibacter koreensis RepID=UPI00035FE542 similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 649.0
  • Bit_score: 1004
  • Evalue 4.30e-290
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 622.0
  • Bit_score: 1004
  • Evalue 1.40e-290
RNA binding S1 domain protein {ECO:0000313|EMBL:AEW00915.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 622.0
  • Bit_score: 1004
  • Evalue 6.10e-290

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2031
ATGGAAAATAACGACCAGGAAACAACAGGGGCTGAAAAAGAACATTCCGTAGAGGCAATGCCCCAGGGTGGAATCGAAGGTGTGCCCTTCCCTGATTTCCCCGAAACAGAATCAGCTTCTGCTGCTCTGGAACCTCAACCTTCAGCAGTGGAAGTTCAGCAAGCTGCACTTCAATCTGCTCATGACGACTTTGACTGGGACATTGACAAAAGAAATGTCACGGTTTACAGCAAGGAAGAACGTCAGAAATACGATGATGTTTATGACAAGACTTTTAAGCAAATCAATGACAGCGAACTCGTCAATGGAACCATCGTAGGAATGACCAAAACTGATGTGGTAATCAACATCGGATTCAAAAGTGACGGATTGGTTGCTCTGAATGAATTCAGGGATACACCCGATCTCAAAGTTGGAGATGAAATAGAGGTGATGGTTGTAGAAAAGGAAGACAAGGACGGAAATCTTCATCTCAGCCGCAAACAGGCACGCACTGTACGTGCATGGGAAAAGATTGTGGACATGCACAAATCCGGCGAAATTGTTACCGGGCTTATTACGAGCAAGACCAAAGGCGGCCTTATTGTGGATGTATTCGGCATGGAAACATTCTTGCCGGGTTCCCAAATCGATGTAAAACCTGTAACTGATTATGATCAGTTCGTTGGAAAGACGATGGAATTCAAGGTTGTAAAAATCAACGATGCCATCAAGAATGCTGTGGTAAGTCACAAAGCGCTTATCGAAAGTGATATCGAACAACAAAGAGCGGAAATCATCGGGAAACTCGAAAAAGGACAAGTACTGGAAGGCACTATCAAGAACATTACAGACTTCGGTGCATTCCTCGATCTTGGCGGACTGGACGGATTGCTATATATCACAGATATCAGTTGGGGACGTATCAACCACCCATCAGAAGTGTTGCATCTTGACCAGAAACTGAATGTGGTTGTTCTCGACTTTGATGATGATAAAAAACGTATCAGCCTGGGCTTGAAACAACTGACACCACATCCGTGGGATACCCTTCCGGAAAATATTAAAGAAGGTGAAATTGTGAAAGGAAAGGTTGTAAATATAGAAGACTATGGTGCATTTCTGGAAATCCTTCCGGGCGTAGAAGGACTGGTTCACGTGAGTGAAATCACATGGGCAAATACCCCGATCAATGCAAAAGAATTCTTCAAACTGGGTGATGAATACGAAGCCAAGATCGTAACCCTCAGCAAGGAAGACCGCAAGATGAGCCTCAGCATCAAACAAATGACTGAAGATCCGTGGGATAGCATTGAAACTAAATTCCCTGAAGGAAGCAAGCACAAAGGAATCGTGAAAAACATCACTCCTTATGGTGTGTTTGTTGAACTGGCTGTCGGAATCGGTGGTATGATTCATATCAGCGACCTGAGCTGGTTAAAACGTTTCAATAACCCGAGTGAATACACGAAAGTCGGTGAAGAAATAGAAGTTATCATTCTCAGCATTGACAAAGAAAACCGCAAACTTCAGTTGGGCCACAAACAAATTGAAGAAGATCCCTGGAATTCGCTGGAAGAAACTTTCCCTGTGGGAAGTATTCACGAAGGAGTTGTAACAAGGCGTGACGAAAAGGGCGCAATCGTTCAGTTACCTTACGGACTGGAAGGTTTTGCTCCCAACAGACACCTGAAACGTGAAGATGGCAAATCAATTACAATTGATGAAACCGCCCAGTTTATGGTGATCGAATTCGACAGAAATGAAAAGAAAATCATCCTGAGCCACACACGCGTCTGGGAAAGAGAAAAATCTGACGAGAAACATGCTGTTTTGAAAGAGAAGAGAGCGGAAGAAGCTTCAACGAAGAGAGCAGTCAAAAGCATTCAGAACAAAATCGAGAAAACCACACTCGGAGATCTGGGAGTTCTCGCCGATCTGAAAAAGAAGCTGGACAATGATGCTTCAGAAGGAACACCTTCAGCCAAATCTTCAGATGGAGCGGAAACAAAATCTTCAGAAAGTAAAGAGGAAAGCGGAGAAGAAAAATAA
PROTEIN sequence
Length: 677
MENNDQETTGAEKEHSVEAMPQGGIEGVPFPDFPETESASAALEPQPSAVEVQQAALQSAHDDFDWDIDKRNVTVYSKEERQKYDDVYDKTFKQINDSELVNGTIVGMTKTDVVINIGFKSDGLVALNEFRDTPDLKVGDEIEVMVVEKEDKDGNLHLSRKQARTVRAWEKIVDMHKSGEIVTGLITSKTKGGLIVDVFGMETFLPGSQIDVKPVTDYDQFVGKTMEFKVVKINDAIKNAVVSHKALIESDIEQQRAEIIGKLEKGQVLEGTIKNITDFGAFLDLGGLDGLLYITDISWGRINHPSEVLHLDQKLNVVVLDFDDDKKRISLGLKQLTPHPWDTLPENIKEGEIVKGKVVNIEDYGAFLEILPGVEGLVHVSEITWANTPINAKEFFKLGDEYEAKIVTLSKEDRKMSLSIKQMTEDPWDSIETKFPEGSKHKGIVKNITPYGVFVELAVGIGGMIHISDLSWLKRFNNPSEYTKVGEEIEVIILSIDKENRKLQLGHKQIEEDPWNSLEETFPVGSIHEGVVTRRDEKGAIVQLPYGLEGFAPNRHLKREDGKSITIDETAQFMVIEFDRNEKKIILSHTRVWEREKSDEKHAVLKEKRAEEASTKRAVKSIQNKIEKTTLGDLGVLADLKKKLDNDASEGTPSAKSSDGAETKSSESKEESGEEK*