ggKbase home page

scnpilot_solids2_trim150_scaffold_709_curated_2

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 1013..2992

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000256|SAAS:SAAS00089907};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 662.0
  • Bit_score: 809
  • Evalue 3.60e-231
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 642.0
  • Bit_score: 807
  • Evalue 2.40e-231
Ribonuclease R n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF88_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 642.0
  • Bit_score: 807
  • Evalue 7.50e-231

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1980
ATGGGGAAGAAGACCCGTGAAAAGATGGGGAGATATGTAAATGGCGTTGTTGATATTACAAAATCAGGTATGGGATATGTAATCGTGGAAGGCAGGAGTGAAGATGTCCTGATCCGCCCCAATGACCTGAATAAAGCAATGAACGGAGATACTGTAAGGGTGAGGCTGAAAGATAAAAATGGAAGCAAGCGTACAGAAGGTGTGGTCACTGAAATACTGACCAGAAAGCAAAGTGAATTTATCGGCAAAATAGAATTGAGCGATCATTTTGCATTCTTTGTTCCGGCTTCAAACCAGACGATTCCTGATTTTTATATCAGTGGAGAAAATCTGAATGGCGCCAAAGACAATGATCAGGTTATTGTTCAATTAATCGGGTGGGGAAAAGGTGAAAGAAAACCCGAAGGCAAAGTGCTGTCCGTTCTCGACATAAAAAATTTGAATGATCTCGCCATGAAAGAGATCATTGTTCAAAATGGTTTCAGTATCAATTTTCCCAAAGAAGTCCTGGATTCGGCAGATGTCCTCGATCCTGCGATAACTTCAGCAGAACTTTCAAGGAGGCGTGATTTCAGAGATGTGCTGACCATTACCATTGATCCGGTGGATGCCAAAGATTTTGACGATGCCCTTTCTTTTAAAAAATTAGACAACGGGGATTTTGAAATAGGTGTTCATATTGCCGATGTAAGTCATTTTCTGAAAGAAGGTTCTGCTCTCGATGCGGAAGCTTATAAAAGAGCTACCAGCGTTTATCTTCCCGACCGGGTGGTGCCGATGTTGCCCGAAAAGATTTCAAACGAACTTTGCAGTCTGAGGCCATTTGAAGAGAAATATTGTTTCTCCGCGGTATTCGTCATTTCTGAAAAATATAAAATTAAAGACTCCTGGTTTGGCAAAACCGTTATCAAAAGCGATCACCGGTTTAATTATGATGAAGTCCAGAAAACGATTGAAACCGGTGAAGGGATTTATAAGGATGAAATTATCCAGTTAAATACGATTGCTAAAAATTTCAGAAGGGAAAGATTTAGAAAAGGGGCGATTAATTTCTCAAGTATCGAGGTCAGGTTTTTGTTGGATGCAGAAGGGAGGCCGCGTGGAATTATTTTGAAAGAAAGTAAGGAAGCTCATCAGTTAATCGAAGAATTTATGCTGGTAGCCAACAGGGAAGTTGCCGGTTATGTCAGTAACCAAAAGGTAAAGGACCCCATCCCTTTTCCATACCGGGTGCATGATATACCGGATGAAGAAAAACTGAAACCATTTGTTGCTTTTGCAAAAAAATTCGGTTACCATTTTGATATGCGCGACGAGAGAGCAGTGGCCCGGTCGTTCAATCAGATGTTGGAAGATGTAAAAGGGAAACCCGAACAGCATGTACTTGAACAATTGGGGATCCGCACAATGGCAAAGGCAGAATACAGAACTAAAAATATAGGTCACTATGGACTTGGGTTCAGGAATTATTGTCATTTTACTTCTCCGATTCGCCGGTATCCGGATGTGATGGTACACCGGATTCTGGAACAGGTATTGAGTAATAAAATATCGCCGGATGAAAAAATGGACGACAAATGTAAACATTGCAGTGAGCAGGAGAGGGCAGCGATGGAGGCCGAGCGTGCAGCAAATAAGTATGAACAGGTTTTGTATATGAGCGATAAACTCGGACAGGAACTGGAAGGCGTAATCAGCGGAGTGGCATCTTTTGGTTTTTGGGTGGAAACAGTAAATGAAAAATGTGAAGGGCTGGTTAGTGTAAAAGATCTTTCCGATTATGATGATTTCCGCCATGATGAAACCGATTATTCATTGGTGGGTATCCGTACAGGAAGAAAGTTCCGGATGGGAGATTCAGTAAAAGTGATTCTCACTGCGGCCAATATCGAAAAAAGGCAGTTGGATTTTGAATGGGTTCCGGTAAACCAGTCTATAAAAAAGCGTGTTGCTTATCACCCGAAAAAAGTAAAGAAATAA
PROTEIN sequence
Length: 660
MGKKTREKMGRYVNGVVDITKSGMGYVIVEGRSEDVLIRPNDLNKAMNGDTVRVRLKDKNGSKRTEGVVTEILTRKQSEFIGKIELSDHFAFFVPASNQTIPDFYISGENLNGAKDNDQVIVQLIGWGKGERKPEGKVLSVLDIKNLNDLAMKEIIVQNGFSINFPKEVLDSADVLDPAITSAELSRRRDFRDVLTITIDPVDAKDFDDALSFKKLDNGDFEIGVHIADVSHFLKEGSALDAEAYKRATSVYLPDRVVPMLPEKISNELCSLRPFEEKYCFSAVFVISEKYKIKDSWFGKTVIKSDHRFNYDEVQKTIETGEGIYKDEIIQLNTIAKNFRRERFRKGAINFSSIEVRFLLDAEGRPRGIILKESKEAHQLIEEFMLVANREVAGYVSNQKVKDPIPFPYRVHDIPDEEKLKPFVAFAKKFGYHFDMRDERAVARSFNQMLEDVKGKPEQHVLEQLGIRTMAKAEYRTKNIGHYGLGFRNYCHFTSPIRRYPDVMVHRILEQVLSNKISPDEKMDDKCKHCSEQERAAMEAERAANKYEQVLYMSDKLGQELEGVISGVASFGFWVETVNEKCEGLVSVKDLSDYDDFRHDETDYSLVGIRTGRKFRMGDSVKVILTAANIEKRQLDFEWVPVNQSIKKRVAYHPKKVKK*