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scnpilot_solids2_trim150_scaffold_1948_curated_13

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(15213..16649)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERL3_EMTOG similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 486.0
  • Bit_score: 519
  • Evalue 3.90e-144
two component, sigma54 specific, transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 486.0
  • Bit_score: 519
  • Evalue 1.20e-144
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:AFK02316.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 486.0
  • Bit_score: 519
  • Evalue 5.50e-144

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Taxonomy

Emticicia oligotrophica → Emticicia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1437
ATGAATTCTGATAAAAGAATACTGATTATAGACGACGATGTGGACATGTGCACTTTACTGAGCCGCTACCTTAATAAAAAAGGGTATGAAACGGATATGGCACACAATGCAACCAAAGGTCTTGCAAAGTTTAATGAAGAACATTTTGACGTAGTACTCTGCGATTTCCGGCTGGGAGACAAAGATGGAAAAGATGTATTGCTTAAGGTGAAAGGAAATAAGCCGGGTACAGTGGTTATCATTTTTACAGGATACTCAGATATCAAAATCGCCGTAGATGTTATTAAACACGGGGCTTTTGATTATATCACCAAACCCCTGATTCCCGATGAAGTTTTAAGTGTCATTGAAAAAGGTATTGCTGCGTCTGAAAAGAATGGAGCTAATTCCATAAAGGACAGTGACCCTTCACCTGTCAACAAGGAACCAAGTGTGACCAATGTGCACCTCAATGAGGACTATCTGATGGGGGAAGATGAAAGCATTATAAAGGTTTTTAACCAGGTCGGCATTGTGGCAAAAACGAATTACAGTGTCATTCTTTATGGAGAAAGCGGTACAGGAAAAGAGGTTATCGCAAAAACCATTCATGAAAATAGTTTGCGCAAGAATGGCCCTTTCATTGCAATGGATTGCGGAACCCTTTCAAAAGAATTGGCAGGAAGTGAATTATTCGGACATGTGAAAGGCGCATTTACCGGCGCGGTGACAGACAAAGTCGGCCATTTTGAACTTGCAGACGGTGGAACCCTTTTTCTCGATGAAGTTGCCAACCTGAGCAGGGAAGTTCAGGCTTCGCTGTTGCGTGTGATTCAGGAAAGGAAGTTTAAGAGAATAGGAGGTACAAAGGAAAAAAATGTGGATGTAAGAATTATAGTGGCAAGCAATGAAAACCTTCAGGAAGCATATCAGAAAGGGAGATTCAGAGAAGATTTATATCACAGGTTCAATGAATTTTCTATCCGGCTCCCGCCGCTGCGCGAGCGCAAAAGTGATGTATTGTTATTTGCTGATTTTTTTCTCAAAAGGACAGACAGAGAAATCGGAAGGGATATTAAAGGATTTGAAGATGAAGTGTTGAGCATTTTTAAAAGATATCCCTGGCCGGGGAACCTGCGGGAATTGAGAAATGTGGTTCGCCGGGCGGTATTGCTGACAAATGACGGATTGATAACATCCAAAGTGTTGCCATGGGAAATCACACAATCCGTTTCTTACAAAGAGGTTCATAATACCATTCAGGAAGATACCCAGTCACAGACGGATGATTCGGAAATAAAAGAAATGGATTTGAAAGATGCAGCCGCCAAAGCGGAATATGAAACTATTATGAACGTTTTGAAAGAAGTTAATTACAATAAAACAAAGGCTGCCGAGATTTTAAAAATAGACCGCAAGACGCTGTACAATAAGATGAAAATTTTCGAGTCGATGTAA
PROTEIN sequence
Length: 479
MNSDKRILIIDDDVDMCTLLSRYLNKKGYETDMAHNATKGLAKFNEEHFDVVLCDFRLGDKDGKDVLLKVKGNKPGTVVIIFTGYSDIKIAVDVIKHGAFDYITKPLIPDEVLSVIEKGIAASEKNGANSIKDSDPSPVNKEPSVTNVHLNEDYLMGEDESIIKVFNQVGIVAKTNYSVILYGESGTGKEVIAKTIHENSLRKNGPFIAMDCGTLSKELAGSELFGHVKGAFTGAVTDKVGHFELADGGTLFLDEVANLSREVQASLLRVIQERKFKRIGGTKEKNVDVRIIVASNENLQEAYQKGRFREDLYHRFNEFSIRLPPLRERKSDVLLFADFFLKRTDREIGRDIKGFEDEVLSIFKRYPWPGNLRELRNVVRRAVLLTNDGLITSKVLPWEITQSVSYKEVHNTIQEDTQSQTDDSEIKEMDLKDAAAKAEYETIMNVLKEVNYNKTKAAEILKIDRKTLYNKMKIFESM*