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scnpilot_solids2_trim150_scaffold_1499_curated_4

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(3963..5126)

Top 3 Functional Annotations

Value Algorithm Source
Putative two component, sigma54 specific, transcriptional regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6W5_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 387.0
  • Bit_score: 604
  • Evalue 5.70e-170
putative two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 387.0
  • Bit_score: 604
  • Evalue 1.80e-170
Putative two component, sigma54 specific, transcriptional regulator {ECO:0000313|EMBL:AEV97968.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 387.0
  • Bit_score: 604
  • Evalue 8.00e-170

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1164
ATGCCTTCAATTTTGATTATTGACGACGAAGCTGCTATCAGAAAAACATTGGGAGAGATTCTGGGATTTGAGGGATACAAAATTACAGATGCCTCTGATGGTGAAGAAGGATTGAAACTTTTTAGGGAAAAAGAATTTGATGTGGTATTGTGCGATGTCAAAATGCCGAAGATGGATGGCATTGAATTTTTGGAAAAAGCAAAAGAAATTAATCCGGAAGTACCTGTTGTGGTTATCAGCGGACACGGAAATATTGACACAGCCGTGGAAGCTGTTAAGAAGGGGGCTTTTGATTATATCAGCAAACCTCCGGATCTGAACCGGATGCTCATCACGCTTAGAAATGCTTCAGATAAAAATATTTTGCAGGCTGAAACCAAAGTGCTGAAGAGAAAAGTGACCAGGGTGCAGGAAATTATTGGTGAAAGCCCTGAGGTAAAAAAGATAAAAGAAACCATTGAAAAAATTGCACCTACCGATGCAAGGGTTTTAATTACCGGTGAGAGTGGCGTTGGAAAAGAACTTGTGGCAAGGTGGATTCATGCCAAGAGTCTTAGATCAGGACAACCTATGGTTGAGGTCAACTGTGCTGCCATTCCGAGCGAGCTTATCGAGAGTGAATTGTTTGGACACGAAAAAGGAAGTTTTACTTCCGCAGTCAGGCAACGGATCGGAAAATTTGAGCAAGCCCACAACGGGACACTTTTTCTTGACGAAATAGGAGATATGAGTTTGAGGGCACAGGCCAAAGTTTTGCGCGCCCTTCAGGAGGGAAAAATTACAAGAGTAGGAGCCGACAAAGATATCCGGGTGGATGTAAGAGTGATTGCGGCAACAAATAAAGACCTTTTGAAAGAAGTGGAGAACAAAAATTTCCGGCTTGATCTTTATCACAGGTTGAGCGTTATCATTCTCCATGTACCTTCATTGAATCAGCGAATCTCAGATATCCCCATGCTGGTTGATAAATTTTTGCAGGATATCGCTTTGGAATATGGACGCCCAAAGAAAACTATTGACAAAAGGGCGGTTGAATTGTTGCAGAAAAATAAATGGACCGGAAATGTACGCGAACTTCACAATGTAGTTGAAAGACTGATTATCCTTTCAGGAAAAACGATCAGAACAGAAGACGTGCAGAATTATGTGATGCCCGCCAGATAA
PROTEIN sequence
Length: 388
MPSILIIDDEAAIRKTLGEILGFEGYKITDASDGEEGLKLFREKEFDVVLCDVKMPKMDGIEFLEKAKEINPEVPVVVISGHGNIDTAVEAVKKGAFDYISKPPDLNRMLITLRNASDKNILQAETKVLKRKVTRVQEIIGESPEVKKIKETIEKIAPTDARVLITGESGVGKELVARWIHAKSLRSGQPMVEVNCAAIPSELIESELFGHEKGSFTSAVRQRIGKFEQAHNGTLFLDEIGDMSLRAQAKVLRALQEGKITRVGADKDIRVDVRVIAATNKDLLKEVENKNFRLDLYHRLSVIILHVPSLNQRISDIPMLVDKFLQDIALEYGRPKKTIDKRAVELLQKNKWTGNVRELHNVVERLIILSGKTIRTEDVQNYVMPAR*