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scnpilot_solids2_trim150_scaffold_5184_curated_6

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(3279..4502)

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain protein n=2 Tax=Porphyromonas gingivalis RepID=U2JSM5_PORGN similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 391.0
  • Bit_score: 547
  • Evalue 8.70e-153
RHS repeat-associated core domain protein {ECO:0000313|EMBL:ERJ67899.1}; TaxID=1227271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivalis F0570.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 391.0
  • Bit_score: 547
  • Evalue 1.20e-152
putative integrin subunit alpha similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 390.0
  • Bit_score: 545
  • Evalue 1.00e-152

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Taxonomy

Porphyromonas gingivalis → Porphyromonas → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1224
ATGCATGGGGGCAGAAAACGCAACCCTGCCAACTGGTCTTATACCGGTGTACCTACCACTCCCGACTGGCTGTACAGAGGTTATACCGGACATGAACATGTAGCAGCCTTCATCCTCATCAACATGAACGGCCGCATGTACGACCCGATGACGGGCTTAATGCTTTCGCCTGACAATTATGTGCCCATGCCCTTTAGCCCCGGTGGCTATAACAGGTATCTGTATGCGAATGGCAACCCGCTGAAGTTTGTGGATCCGGACGGAGAGTTTATATGGTTTGTGCCTGTCATTATTGGAGCGGTAGTGGGAGCTTATGCGGGAGCATCTATTCAATCAGGAACAGCAGCTTTTTGGAATTGGAGACCTGATTTTTGGAAGGGAGCTATCACGGGTGCAATAGTGGGTGCTACTCTGGGATATGGGGTATCAGCCGCGTTTGGAGCCTCCGGCATGACAACTGCTGTCACAACGGCAGAAGGTGTCGCAAATGTAACAACCAAATCTGCTGGATTTGTTAGTTCAGTACTTAATAGTGGTTCAATAAACATTGGAATAAATGCGCTTTCAGGTGGTGGCTGGGACGGTGCCTGGAAAGCAGGAATTGTGGGTATGGCAACAGGTGCCTGGAATGCAAGTGGTGGATTCGGAATGGTTAAAGGTTTCGGCACAACCTCAGATTATGGAAAATTAGCAGGTAAATTGGGCTATCAAATGATAGGTACCACGGGCCAGTCTATCGGTAATAATTGGGTGAGAGGCAATGGATTATTCTCAAGGGTAACACTAGGTGTTGGACCTATTAATTTGACTCTCGGCAAGGGACAGAAACTTTTTCAATTGCAAAATAACTTTGGTGGAATTGCAATGAATACCTTTGGGTTGATTAATACTGTCTTTGGTGGAAAAATTGATTTTGACTGGAAAAACTTGTCTTTAAATTACAAAGGCGGCCTGATAGACAAAATGTATCCACCTACATTTTATCAAGGCGGGAAGGAATATCGTAATGATGCTGGCTTCAGTCCTTACGTTGTAACAGGGAACAGTAATCTTAATAAAGTTTATAGCCATGAATTGCATCATCTGTGGCAGTCACGCGCTTTCAACAATTTATATCTATTAAACTATGGTTTACAGGGAATCAATGCTCTTTTAATGGGCGGTGAATTTTTGAGTACTTACAATTTTTATGAAGATTTAGCTTATGGAAGGTATTGGTGGTAA
PROTEIN sequence
Length: 408
MHGGRKRNPANWSYTGVPTTPDWLYRGYTGHEHVAAFILINMNGRMYDPMTGLMLSPDNYVPMPFSPGGYNRYLYANGNPLKFVDPDGEFIWFVPVIIGAVVGAYAGASIQSGTAAFWNWRPDFWKGAITGAIVGATLGYGVSAAFGASGMTTAVTTAEGVANVTTKSAGFVSSVLNSGSINIGINALSGGGWDGAWKAGIVGMATGAWNASGGFGMVKGFGTTSDYGKLAGKLGYQMIGTTGQSIGNNWVRGNGLFSRVTLGVGPINLTLGKGQKLFQLQNNFGGIAMNTFGLINTVFGGKIDFDWKNLSLNYKGGLIDKMYPPTFYQGGKEYRNDAGFSPYVVTGNSNLNKVYSHELHHLWQSRAFNNLYLLNYGLQGINALLMGGEFLSTYNFYEDLAYGRYWW*