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scnpilot_solids2_trim150_scaffold_737_curated_21

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(24891..25478)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase E; K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 194.0
  • Bit_score: 233
  • Evalue 4.20e-59
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 194.0
  • Bit_score: 233
  • Evalue 1.90e-58
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FCEF9 similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 192.0
  • Bit_score: 234
  • Evalue 1.00e-58

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 588
GTGAATCGTTATTTTTTTATTTACAAACCTTATCGCGTGTTGTCTCAGTTTACTTCTGAGAGTGATAAAAAATGTCTGAAAGATTTTTTCTCTGTTCCTTCAAATGCTTATCCGGTGGGGCGTCTGGACTATGACAGCGAAGGGTTGTTGATAATTACGGATGATAAAAAACTGAATCATTTATTGCTCGATCCCCGGCGCGGACACAAGCGTGAGTATTTTGTACAGGTAGAGGGGATCCCTTCCACATATCAGATTTCGATGCTTGAGAAAGGAGTTGGGATTTCGATTGACGGGAAAAAATATTTAACCATGCCATGTGAAGTATCGGTTTTGGATAATCCGCCGGATGTTCCGGAAAGATTTCCTCCGATAAGAGTGAGAAAAACAGTACCCGACAGTTGGCTGAGATTAATTTTAAAGGAAGGAAAAAACCGGCAGGTCAGAAAGATGACAGCCGCAGTTGGGTTGCCTACCCTGAGACTAATCCGATGGAAAATTGAAAACCTGTCTGTAAAAAATTTGCATCCGGGAGATATGATGGAAATCACAAAGAAAGATTTGTATAACTTGCTCCACTTAAAATAA
PROTEIN sequence
Length: 196
VNRYFFIYKPYRVLSQFTSESDKKCLKDFFSVPSNAYPVGRLDYDSEGLLIITDDKKLNHLLLDPRRGHKREYFVQVEGIPSTYQISMLEKGVGISIDGKKYLTMPCEVSVLDNPPDVPERFPPIRVRKTVPDSWLRLILKEGKNRQVRKMTAAVGLPTLRLIRWKIENLSVKNLHPGDMMEITKKDLYNLLHLK*