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scnpilot_solids2_trim150_scaffold_2296_curated_18

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(7776..8432)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU72_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 220.0
  • Bit_score: 293
  • Evalue 2.10e-76
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 220.0
  • Bit_score: 293
  • Evalue 6.50e-77
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 220.0
  • Bit_score: 293
  • Evalue 2.90e-76

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 657
ATGCAAATAGACGTCTTTAATATTGAAGGAAAGAAAACCGGCAGATCAGTAGAATTGCCGGACGAGATATTCGCCGCAGAACCAAATAACCACGTGGTTTGGCTGGCTGTGAAACAATATCTGGCTGCTCAGCGTCAGGGTACTCACAAGACCAAAGGGCGTTCAGAAGTACAGGGGAGCAGCAGAAAATTGCATAAGCAAAAGGGAACCGGCGGCAGCCGTAAAGGAAACATCCGCAACCCTCTTTACAAAGGTGGTGGTACCATTTTTGGCCCCAAACCTCACAAGTATCAATTGAAGGTAAACCGGAAAGTAAAAGACCTGGCGCGTATCGGTGCACTAAGCAGCAAGGCTACTGCCGGAAAAATCTGGATTTTGGAAGATGCCTGCATAGAAATGGAGAAGCCATCAACAAAAAATTTCACAGGTATCCTGAACAGCCTGAATACAAATACGCGGAATTTATTATTTGTTATGCCGGAATTCAATGAAAATGTTTGTAAGAGTATCCGGAATGTACCCAGTGTTTTCGGTACAGTGTTGAGTGATGTACACACCTACGATATTTTAAATGCTGATGGCCTGGTGCTTACAGAGGCGGCTGCAAAAATATTTTCAACTGAAGAAGTTGCGGGTGATGAACCAGTAAAAGCATAA
PROTEIN sequence
Length: 219
MQIDVFNIEGKKTGRSVELPDEIFAAEPNNHVVWLAVKQYLAAQRQGTHKTKGRSEVQGSSRKLHKQKGTGGSRKGNIRNPLYKGGGTIFGPKPHKYQLKVNRKVKDLARIGALSSKATAGKIWILEDACIEMEKPSTKNFTGILNSLNTNTRNLLFVMPEFNENVCKSIRNVPSVFGTVLSDVHTYDILNADGLVLTEAAAKIFSTEEVAGDEPVKA*