ggKbase home page

scnpilot_solids2_trim150_scaffold_2296_curated_21

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(9832..10023)

Top 3 Functional Annotations

Value Algorithm Source
ColD-shock DNA-binding protein family n=5 Tax=Riemerella anatipestifer RepID=E4T9D7_RIEAD similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 63.0
  • Bit_score: 101
  • Evalue 2.60e-19
Cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 63.0
  • Bit_score: 101
  • Evalue 8.10e-20
Cold shock protein {ECO:0000313|EMBL:AFR36156.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 63.0
  • Bit_score: 101
  • Evalue 3.60e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Riemerella anatipestifer → Riemerella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 192
ATGCAGGAAGGAACAGTAAAGTTTTTCAATGAATCCAAAGGTTTTGGATTCATCAAACCAGATGACGGATCAAAAGACATTTTCGTTCACAGCAGCGGATTGAAAGCAACAATCAAGGAAGGTGATAAAGTTGTGTATGAAGTTGAACAGGGAAAGAAAGGTCCAAATGCAGTCAATGTCAGATTAGCCTGA
PROTEIN sequence
Length: 64
MQEGTVKFFNESKGFGFIKPDDGSKDIFVHSSGLKATIKEGDKVVYEVEQGKKGPNAVNVRLA*