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scnpilot_solids2_trim150_scaffold_959_curated_3

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(2012..2575)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NLM8_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 181.0
  • Bit_score: 160
  • Evalue 1.80e-36
Uncharacterized protein {ECO:0000313|EMBL:AHF17230.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 181.0
  • Bit_score: 160
  • Evalue 2.50e-36
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 192.0
  • Bit_score: 125
  • Evalue 1.50e-26

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
GTGCCCCTGGAAAATATGATATGGGACCGTATTTCACAAGATGACAAAAATGCTTATGCAGAGGCATACCGGTTTTTATTCAACAGATTTTACAATTATGGAGTCAGATTCACAACCGATGAATTGCTGATCGAAGATGCTATCCAGGAGACACTTTTATTACTTTGGGATAAACGGGGATCTTTGTCTGAAATCAAGTATCCCTCAACCTACTTTTACAGTGTCTTTCGGAATAACCTGATCAACAGGTTGCGGTTAAAAAAGACGGAACGTTTCGGGGAAGAATTAGAAATCCTTGATTTTTCTGTTGAAGAATTCATTTTTGAAAAAGAAACTGAGATCTTGTTAAAAGGTAAACTGAAAAATGCCATTGAAGGCCTTACCTCCAGACAGCGCGAAGCCATTTATCTGCGTTTTTATGAAGGGTTGTCTTATGAAGGCGTTGCCTCAATACTTGGCATTAGCACAAAAGCTACATACAAAATAATGGCACGGGCACTCAGTCAGTTAAGGGATCTTATCGGGATTCTGGTCTTAGCCTTTTGGTATTTTTTATCAAAATAA
PROTEIN sequence
Length: 188
VPLENMIWDRISQDDKNAYAEAYRFLFNRFYNYGVRFTTDELLIEDAIQETLLLLWDKRGSLSEIKYPSTYFYSVFRNNLINRLRLKKTERFGEELEILDFSVEEFIFEKETEILLKGKLKNAIEGLTSRQREAIYLRFYEGLSYEGVASILGISTKATYKIMARALSQLRDLIGILVLAFWYFLSK*