ggKbase home page

scnpilot_solids2_trim150_scaffold_2929_curated_7

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(4825..7509)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:GAO27769.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 920.0
  • Bit_score: 781
  • Evalue 1.10e-222
Zinc finger CHC2-family protein id=4690952 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 906.0
  • Bit_score: 779
  • Evalue 5.10e-222
zinc finger CHC2-family protein similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 912.0
  • Bit_score: 588
  • Evalue 4.00e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2685
ATGGAGATAAAAGACATCAAACAACAACTAACCATTAACCAGGTGTTAGCGCATTACCATTTAAAACCCGATAAAAACCAAAGATTACTTTGCCCCTTCCATCCGGACAAAACCCCGAGCCTGCAAATTTATCCTGCAACAAATACTTACTGTTGTTTTTCTTCCAACTGTAATGCAGGAACAGGCGATGCGATACAGTTTATAGCACTGATAGAGAAGTGTAATAAACATGAAGCTTTATTAAAAGCAACTTCATTATTAAATCCCGATGCTACGACCGGGACAGGTGGCAATACAACAGTAGAAGCAAAACCGGCAGCAGCAAAATTATTTATAGAGGATAACAGTATTGATAAAATTGCAGTGCTGACAAAATATTTTAGTTACTATAAAGCAGGATCGCCAAGAAGTAAAAAGGCGGTGGATTATTTACAAAGCCGTTGCATTGATTACAGGATTATAGAAACTGCGTTCAATAGTGGCGGCCTGCATGTAGAAAGCAAACACCATCACTTAATAGAAAGCATGATAAAAGTCGGTTTACTGAAACCATTACCAACAAACGGTTACAGCGTGTGGGCAAAAGACTGCATCATCTTTCCGTTAAAGAACCAGGATAATAAAATTGTGAGCTTGTACGGAAGAAGTACAACGAATGATAAAGAGCAAAGGCATTTTTATTTAAGCAATCGTTCCGGATTATATCCGGGCTATCCAACCTTACAAACAAAGAAACTGATATTAACGGAAAGCATTATTGATGCCGCTTCACTGCTTCAACAGGAAGCCATAAAAAATGATTACACCATCCTTGCGCTTTACGGCACCAACGGGCTGACCGAAGAACATACAAAAGCAATCATTGAATTACCACAGCTTGAAGAAATTATTTTAATGCTGGATGCAGACGAAGCCGGTGAAGCTGCAACGGCTAAACACACCGTTACATTAAAACAACTGTTACCGGAAATCAAAATCAGTAAAGTAATCTTACCTGTGGGAGAAGATGTAAATAGTTTATTGCAAGGCCATGATGATGCAAAGGTTTTATCTGACTTAATAGAAAGCAGGATTGATTTTTCTTTTTCAATTGAAAAAGAAAAATTACAATCTTCTGAAACCACCACCACACCAACGCTACAACCACTTGCAAAGCTTGATACAAAGAATCCTGAACTGTTGATTTATGATAACTGCCAGTTAAGAATAGAAATATGGGGCGGCATTAAGATAACAGGGCTTGACAGGATGAAGGTTACTTTAAAAGTTCAACATAAGACAAAGCAACTGTTGCCTATCAGGGACACATTAGATTTATACAGCCGCCAGCAAACAGAAAATTTAATACAAACCATCAGTGAAAACTTTGATGCCAATATCAAGCAAACAGAAACCACCATCAGCGAGTTAACGAACGAGTTAGAGAACTACCGTATTAAAAAAATAGAAGCACTGCAACCCAAACAGGAAACAAAAAACGAACTGTCACAGGCACAAAGAACAACGGCCATCAATGAACTGAAGAAAGAAAAGTTGTTAGAGCGGCATAACAAAATGATAGGCTTAACCGGCATAGTAGGCGAAGAAAAAAACCGGATGATAGCTTACCTGATTTATGGGTACAGAAAAAACGGAAACCCTTTGCATGTAATGTTTTTGGGTGCAAGCGGCAGCGGTAAAACATACCTGCAAGAAAAGATAAGCGAACTGATACCGGAAGAAGATAAAATGGAGATAACGCAAATCACTGAAAACGCTTTATACTACTTTAAGCAGGAGGAACTAAAAAACAAGCTGATAATTTTTGAAGACCTGGACGGAGCTCTGCAGGTGTTCTATCCGTTGAGAGAGTTACAGACCAAAAGAAAAATCAGCAAGACCGTAACACTAAAGGACAGCAAAGGCAATTTAAAAACGATAACGATAGTAGTGGAAGGCCCTGTTTGTATTAGTGGTTGTACAACAAAGGAAAAAATTTACGAGGACAATGCCAACAGATGTATCCTGCTGTACATAGATATGAGTAAAGACCAGGATAAAAAAATAATGGAGTACCATGCAGCCGTAGAAAGCGGCGACATTGACCAGGAGAAAGAACAGCAATACAAAGAGCTGTTTAAGAACATACAAAGAGTATTGCGACCAATACAGGTAAACAATCCTTACTCAAAATTTATCACATTGCCGGAAGCCGTGTTCAAGCCAAGAAGAACAATAACACTGCTGAGAGGATTTATAAAAGCGATTGCATTTTATCATCAGTACCAACGGGAAGTAAAGAAAGACAAACACGGCCAGTTGTACATTGATGTAACGATAGAAGATATAGAACAGGGATTTTATTACATGAAAGATGTTTTGTTCTCAAAGAGTGATGAACTGACCAAAGCCACCAGGGAATTTTTAGAGCAGCTTAAACAACTATCCAAACAAACCGGCAGCGATACGTTTAATGCAAAGGCAATCCGGGAATCGTTGCGGATGAACCCGGGCAATATGAAAAGGTATTTATCAGAGTTGGTACGGTACGGCTATATAAAGGCAAATGGCAACCGTTACAGAAAAGGCAGCTATGAGTATAGCATTGTAAAGATGGACGAATACGAGGCTTTAAAATCACAAATAGAGCAACATTTACAAAGCATCCTGCAAACAATCAAAGGCCACATCAGTAAAAAAGGTTAG
PROTEIN sequence
Length: 895
MEIKDIKQQLTINQVLAHYHLKPDKNQRLLCPFHPDKTPSLQIYPATNTYCCFSSNCNAGTGDAIQFIALIEKCNKHEALLKATSLLNPDATTGTGGNTTVEAKPAAAKLFIEDNSIDKIAVLTKYFSYYKAGSPRSKKAVDYLQSRCIDYRIIETAFNSGGLHVESKHHHLIESMIKVGLLKPLPTNGYSVWAKDCIIFPLKNQDNKIVSLYGRSTTNDKEQRHFYLSNRSGLYPGYPTLQTKKLILTESIIDAASLLQQEAIKNDYTILALYGTNGLTEEHTKAIIELPQLEEIILMLDADEAGEAATAKHTVTLKQLLPEIKISKVILPVGEDVNSLLQGHDDAKVLSDLIESRIDFSFSIEKEKLQSSETTTTPTLQPLAKLDTKNPELLIYDNCQLRIEIWGGIKITGLDRMKVTLKVQHKTKQLLPIRDTLDLYSRQQTENLIQTISENFDANIKQTETTISELTNELENYRIKKIEALQPKQETKNELSQAQRTTAINELKKEKLLERHNKMIGLTGIVGEEKNRMIAYLIYGYRKNGNPLHVMFLGASGSGKTYLQEKISELIPEEDKMEITQITENALYYFKQEELKNKLIIFEDLDGALQVFYPLRELQTKRKISKTVTLKDSKGNLKTITIVVEGPVCISGCTTKEKIYEDNANRCILLYIDMSKDQDKKIMEYHAAVESGDIDQEKEQQYKELFKNIQRVLRPIQVNNPYSKFITLPEAVFKPRRTITLLRGFIKAIAFYHQYQREVKKDKHGQLYIDVTIEDIEQGFYYMKDVLFSKSDELTKATREFLEQLKQLSKQTGSDTFNAKAIRESLRMNPGNMKRYLSELVRYGYIKANGNRYRKGSYEYSIVKMDEYEALKSQIEQHLQSILQTIKGHISKKG*