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scnpilot_solids2_trim150_scaffold_11702_curated_1

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(8..613)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU97_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 201.0
  • Bit_score: 334
  • Evalue 7.50e-89
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 201.0
  • Bit_score: 339
  • Evalue 4.30e-90
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 201.0
  • Bit_score: 334
  • Evalue 2.40e-89

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 606
ATGGCACGTCACACAGGACCCAAAACAAGGATTTCAAGGATTTTTGGGGAACCCATTACCGGCAATGGTAAATGGCTAAACAAAAACAGCAACCCTCCGGGGATGCATGGTGCAGCGCGCAAGAGAAAAAGCCTTGGCGAATATGCACTACAGTTGAGAGAAAAGCAAAAAGCAAAATACACGTATGGTGTTCTTGAAAGGCAATTTAAAAAGACTTTCAATGAAGCTGTCCGTCGTAAAGGAGTTACCGGTGAAATGCTGATCAAATTGCTTGAAGCACGTCTGGATAATACAGTTTTTCGTATGGGAATTGCGCCCAGCCGCCAGGCAGCAAGGCAGCTTGTTTCGCACAAACATGTAACCGTAAATGGTGAAGTGCTGAATGTTCCTTCTTATTCATTGAAGCCGGGTGATGTAATCGGACTGAAAGAAAAGAGCGCCCACAATGAATCCATTACTTCCAATTTAAAACCGAAGAATCCAAAATTCAATTGGATTGATTGGAATGAAGGCACCATGAAAGGTACTTTTCTGGCTTATCCGGAAAGAGACAGTGTTCCGGAAAATATCAAGGAATCACTCATCGTCGAATTATACAGTAAATAA
PROTEIN sequence
Length: 202
MARHTGPKTRISRIFGEPITGNGKWLNKNSNPPGMHGAARKRKSLGEYALQLREKQKAKYTYGVLERQFKKTFNEAVRRKGVTGEMLIKLLEARLDNTVFRMGIAPSRQAARQLVSHKHVTVNGEVLNVPSYSLKPGDVIGLKEKSAHNESITSNLKPKNPKFNWIDWNEGTMKGTFLAYPERDSVPENIKESLIVELYSK*