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scnpilot_solids2_trim150_scaffold_56_curated_213

Organism: solids_Xanthomonadales_1

near complete RP 46 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: comp(250129..250728)

Top 3 Functional Annotations

Value Algorithm Source
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2) similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 185.0
  • Bit_score: 245
  • Evalue 1.10e-62
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 185.0
  • Bit_score: 245
  • Evalue 4.90e-62
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUH0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 185.0
  • Bit_score: 245
  • Evalue 3.50e-62

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
TTGGGTGACCGGCAAGACAATCGGGTGGTGTCGTTCGATTCCGAACGCTTGATCCTGGTCGACGAGATGGATCGCGAGATCGGCCACGCCAGCAAGGCCGACGCGCACGCCGGCCGCGGCATCCTGCACCGCGCGTTCTCGCTGTTCGTGTTCAACCCCGCGGGAGAACTGCTGCTGCAGCAGCGCGCGGTCGCGAAACCCTTGTGGCCCGGCTACTGGGCCAACAGTTGCTGCAGCCATCCGCGCGGTGGCGAGGACATGGACACCGCGACGCAGCGGCGTTTGCACGAAGAGCTTGGCTTCACCTGCCCGCTCGAGTTCATCTACAAGTTCCAGTACCACGCCGAGTATGGCGACGCCGGTTCGGAGACCGAACTGTGCTGGGTGTACGTCGGCGTGTCCGATGCGCCGGTGCGCGTCAACGAAACCGAAATCGCCGCGTGGCGTTACGTGAAGCCGGAAGACCTCGACCGCGAGATCACGGAATCGCCCGAACACTTCACGCCATGGCTGAAGCTGGAATGGCAGCGGTTGCGCAGCGAATTCGCCAACCGCTTGCCGGGCAGCGACGAACCGCCGCGCCGCCAGCGCGAAGCCTGA
PROTEIN sequence
Length: 200
LGDRQDNRVVSFDSERLILVDEMDREIGHASKADAHAGRGILHRAFSLFVFNPAGELLLQQRAVAKPLWPGYWANSCCSHPRGGEDMDTATQRRLHEELGFTCPLEFIYKFQYHAEYGDAGSETELCWVYVGVSDAPVRVNETEIAAWRYVKPEDLDREITESPEHFTPWLKLEWQRLRSEFANRLPGSDEPPRRQREA*