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SCNpilot_solid_1_scaffold_65

Search features with annotation key words

Displaying items 91-120 of 281 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_65_89
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86207..86638
DNA (432bp) protein (144aa)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBP2_ACIET
succinate dehydrogenase, cytochrome b556 subunit
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:ACM33721.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sourc
SCNpilot_solid_1_scaffold_65_90
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86670..87035
DNA (366bp) protein (122aa)
Succinate dehydrogenase, hydrophobic membrane anchor protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBP3_ACIET
succinate dehydrogenase, hydrophobic membrane anchor protein
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:ACM33722.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovo
SCNpilot_solid_1_scaffold_65_91
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87058..88863
DNA (1806bp) protein (602aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
succinate dehydrogenase flavoprotein subunit n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000370F4DA rbh
succinate dehydrogenase, flavoprotein subunit
SCNpilot_solid_1_scaffold_65_92
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88890..89591
DNA (702bp) protein (234aa)
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.5.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardio
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Caldimonas manganoxidans RepID=UPI000373DC42
SCNpilot_solid_1_scaffold_65_93
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89600..89884
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003774D16
Uncharacterized protein {ECO:0000313|EMBL:GAD21389.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_65_94
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89927..91237
DNA (1311bp) protein (437aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
Citrate synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TYB3_ALIDB rbh
citrate synthase i
SCNpilot_solid_1_scaffold_65_95
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91394..92260
DNA (867bp) protein (289aa)
S-formylglutathione hydrolase (EC:3.1.2.12)
S-formylglutathione hydrolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F73B7 rbh
S-formylglutathione hydrolase {ECO:0000313|EMBL:EXU78706.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquati
SCNpilot_solid_1_scaffold_65_96
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92434..92841
DNA (408bp) protein (136aa)
nucleoside diphosphate kinase regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F20F4
GreA/GreB family elongation factor {ECO:0000313|EMBL:GAD22208.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
grea/greb family elongation factor
SCNpilot_solid_1_scaffold_65_97
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92869..94005)
DNA (1137bp) protein (379aa)
Acyltransferase 3 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AZU4_DELSC rbh
Acyltransferase family protein {ECO:0000313|EMBL:KFJ11423.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
acyltransferase 3
SCNpilot_solid_1_scaffold_65_98
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94100..95059)
DNA (960bp) protein (320aa)
2-nitropropane dioxygenase {ECO:0000313|EMBL:EIK90427.1}; EC=1.13.12.16 {ECO:0000313|EMBL:EIK90427.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
2-nitropropane dioxygenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMI7_9BURK rbh
2-nitropropane dioxygenase
SCNpilot_solid_1_scaffold_65_99
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95134..96924)
DNA (1791bp) protein (597aa)
Acyl-CoA dehydrogenase domain protein n=2 Tax=Acidovorax RepID=A1W9M4_ACISJ rbh
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABM42949.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
SCNpilot_solid_1_scaffold_65_100
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96985..97917)
DNA (933bp) protein (311aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBQ7_ACIET rbh
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:GAO23205.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sour
SCNpilot_solid_1_scaffold_65_101
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97935..98684)
DNA (750bp) protein (250aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQ34_9BURK
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:EGI78202.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" sou
electron transfer flavoprotein subunit beta
SCNpilot_solid_1_scaffold_65_102
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98821..99630)
DNA (810bp) protein (270aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6G7_ACIDE rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EER59939.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delaf
enoyl-CoA hydratase/isomerase
SCNpilot_solid_1_scaffold_65_103
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99642..100595)
DNA (954bp) protein (318aa)
Histone deacetylase superfamily n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TP54_ACIAC rbh
Deacetylase {ECO:0000313|EMBL:KJA10390.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
histone deacetylase superfamily protein
SCNpilot_solid_1_scaffold_65_104
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100635..101555
DNA (921bp) protein (307aa)
ATPase associated with various cellular activities, AAA_3 n=2 Tax=Acidovorax RepID=A1W9N0_ACISJ rbh
ATPase
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ACM33741.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.
SCNpilot_solid_1_scaffold_65_105
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101552..102541
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036EA680 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD22218.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_65_106
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102634..104667
DNA (2034bp) protein (678aa)
transglutaminase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B098A rbh
Transglutaminase-like enzymes, putative cysteine proteases {ECO:0000313|EMBL:GAD22219.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovor
transglutaminase domain-containing protein
SCNpilot_solid_1_scaffold_65_107
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104701..105369)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQ73_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00115.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_solid_1_scaffold_65_108
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(105390..106499)
DNA (1110bp) protein (370aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
UGMP family protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F6AC5 rbh
SCNpilot_solid_1_scaffold_65_109
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106607..108274
DNA (1668bp) protein (556aa)
Cytochrome c oxidase, subunit I n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AFQ6_NITEC rbh
cytochrome c oxidase subunit I
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ABI59826.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosom
SCNpilot_solid_1_scaffold_65_110
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108264..108851
DNA (588bp) protein (196aa)
Cytochrome C oxidase mono-heme subunit/FixO n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TV15_ALIDB rbh
cytochrome c oxidase mono-heme subunit/fixo
Cytochrome c oxidase mono-heme subunit/fixo {ECO:0000313|EMBL:GAO22328.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sourc
SCNpilot_solid_1_scaffold_65_111
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108885..109487
DNA (603bp) protein (201aa)
Cytochrome c class I n=2 Tax=Alicycliphilus denitrificans RepID=E8TV16_ALIDB
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:GAO22327.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B
SCNpilot_solid_1_scaffold_65_112
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109507..110136
DNA (630bp) protein (210aa)
hypothetical protein; K07152 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein; K07152 id=12550445 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_solid_1_scaffold_65_113
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110133..110792
DNA (660bp) protein (220aa)
hypothetical protein id=12550446 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00550.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_solid_1_scaffold_65_114
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110826..111299
DNA (474bp) protein (158aa)
hypothetical protein; K07112 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein; K07112 id=5079135 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
SCNpilot_solid_1_scaffold_65_115
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111296..111709
DNA (414bp) protein (138aa)
Putative uncharacterized protein id=1267904 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein; K07112 Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
SCNpilot_solid_1_scaffold_65_116
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


111856..114726
DNA (2871bp) protein (957aa)
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3W9_ALIDK rbh
SCNpilot_solid_1_scaffold_65_117
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114767..115744
DNA (978bp) protein (326aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1268622
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003679221 rbh
UTP-glucose-1-phosphate uridylyltransferase
SCNpilot_solid_1_scaffold_65_118
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115751..116386)
DNA (636bp) protein (212aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB76_ACISJ rbh
outer membrane lipoprotein carrier protein LolA
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
Displaying items 91-120 of 281 in total

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