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SCNpilot_solid_1_scaffold_115

Search features with annotation key words

Displaying items 91-120 of 240 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_115_90
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106852..107628)
DNA (777bp) protein (259aa)
Phosphoadenylyl-sulfate reductase [thioredoxin] / Adenylyl-sulfate reductase [thioredoxin] (EC:1.8.4.10 1.8.4.8)
Phosphoadenylyl-sulfate reductase [thioredoxin] / Adenylyl-sulfate reductase [thioredoxin] {ECO:0000313|EMBL:CDM23093.1}; EC=1.8.4.10 {ECO:0000313|EMBL:CDM23093.1};; EC=1.8.4.8 {ECO:0000313|EMBL:CDM23
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E37643
SCNpilot_solid_1_scaffold_115_91
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107642..109060)
DNA (1419bp) protein (473aa)
Siroheme synthase / Precorrin-2 oxidase / Sirohydrochlorin ferrochelatase / Uroporphyrinogen-III methyltransferase (EC:1.3.1.76 2.1.1.107 4.99.1.4)
Siroheme synthase / Precorrin-2 oxidase / Sirohydrochlorin ferrochelatase / Uroporphyrinogen-III methyltransferase {ECO:0000313|EMBL:CDM23407.1}; EC=1.3.1.76 {ECO:0000313|EMBL:CDM23407.1};; EC=2.1.1.1
Siroheme synthase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GV70_PUSST
SCNpilot_solid_1_scaffold_115_92
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109241..110467)
DNA (1227bp) protein (409aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8Z7_9GAMM
sulfite reductase
SCNpilot_solid_1_scaffold_115_93
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110653..112494)
DNA (1842bp) protein (614aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRN
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GV72_PUSST
sulfite reductase flavoprotein
SCNpilot_solid_1_scaffold_115_94
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112762..113817)
DNA (1056bp) protein (352aa)
multidrug transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036439BB rbh
multidrug transporter rbh
Multidrug transporter {ECO:0000313|EMBL:AIJ46141.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni T
SCNpilot_solid_1_scaffold_115_95
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113941..115014)
DNA (1074bp) protein (358aa)
Sulfate and thiosulfate import ATP-binding protein CysA (EC:3.6.3.25)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701, ECO:0000313|EMBL:CDM24470.1};; Sulfate-transporting ATPase {ECO:000
Sulfate/thiosulfate import ATP-binding protein CysA n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DVX8_9BURK
SCNpilot_solid_1_scaffold_115_96
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115011..115847)
DNA (837bp) protein (279aa)
Sulfate ABC transporter permease (Fragment) n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HTJ8_9BURK
Sulfate transport system permease protein CysW
Sulfate transport system permease protein CysW {ECO:0000313|EMBL:CDM24471.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so
SCNpilot_solid_1_scaffold_115_97
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115844..116707)
DNA (864bp) protein (288aa)
sulfate/thiosulfate transporter subunit n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00035ED48D
Sulfate transport system permease protein CysT
Sulfate transport system permease protein CysT {ECO:0000313|EMBL:CDM24472.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so
SCNpilot_solid_1_scaffold_115_98
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116710..117690)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003181A42
sulfate ABC transporter substrate-binding protein
Sulfate ABC transporter, periplasmic sulfate-binding protein {ECO:0000313|EMBL:ADP70613.1}; Flags: Precursor;; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomi
SCNpilot_solid_1_scaffold_115_99
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117834..118301)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9F7_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX44764.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (str
SCNpilot_solid_1_scaffold_115_100
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118413..119474
DNA (1062bp) protein (354aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
tRNA-dihydrouridine synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF73_ACIET rbh
tim-barrel protein, nifr3 family
SCNpilot_solid_1_scaffold_115_101
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119471..119710
DNA (240bp) protein (80aa)
DNA-binding protein Fis n=2 Tax=Acidovorax RepID=A1TKK5_ACIAC
DNA-binding protein Fis
DNA-binding protein Fis {ECO:0000313|EMBL:ABM31493.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
SCNpilot_solid_1_scaffold_115_102
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119941..121542
DNA (1602bp) protein (534aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase (EC:2.1.2.3)
IMP cyclohydrolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003738A19
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
SCNpilot_solid_1_scaffold_115_103
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121628..122479
DNA (852bp) protein (284aa)
Putative amino-acid metabolite efflux pump n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKU4_RUBGI
putative amino-acid metabolite efflux pump
Putative amino-acid metabolite efflux pump {ECO:0000313|EMBL:BAL93631.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatino
SCNpilot_solid_1_scaffold_115_104
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122542..123918)
DNA (1377bp) protein (459aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000370E6E9
glutamate-1-semialdehyde-2,1-aminomutase
SCNpilot_solid_1_scaffold_115_105
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124061..124465
DNA (405bp) protein (135aa)
Response regulator receiver protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF65_ACIET
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACM34335.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_solid_1_scaffold_115_106
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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124465..124830
DNA (366bp) protein (122aa)
response regulator receiver protein; K02658 twitching motility two-component system response regulator PilH id=12550037 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
response regulator receiver protein; K02658 twitching motility two-component system response regulator PilH Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
response regulator receiver protein
SCNpilot_solid_1_scaffold_115_107
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124882..125376
DNA (495bp) protein (165aa)
Putative CheW protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBR3_ACISJ
putative CheW protein
Putative CheW protein {ECO:0000313|EMBL:ABM43688.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain J
SCNpilot_solid_1_scaffold_115_108
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125413..127629
DNA (2217bp) protein (739aa)
chemotaxis protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003664468
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:GAD23739.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
methyl-accepting chemotaxis sensory transducer
SCNpilot_solid_1_scaffold_115_109
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127674..133397
DNA (5724bp) protein (1908aa)
CheA signal transduction histidine kinases n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YP4_RHOFD rbh
CheA signal transduction histidine kinases {ECO:0000313|EMBL:ABD69109.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rho
CheA signal transduction histidine kinase
SCNpilot_solid_1_scaffold_115_110
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133487..134659
DNA (1173bp) protein (391aa)
Twitching motility protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T541_ACIDE rbh
Twitching motility protein {ECO:0000313|EMBL:EER60408.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafiel
twitching motility protein
SCNpilot_solid_1_scaffold_115_111
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134724..135365
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D8E1A
hypothetical protein
UPF0301 protein AVS7_03497 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
SCNpilot_solid_1_scaffold_115_112
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135362..135769
DNA (408bp) protein (136aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=535289 specie
Putative Holliday junction resolvase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBQ9_ACISJ
holliday junction resolvase-like protein
SCNpilot_solid_1_scaffold_115_113
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135766..136275
DNA (510bp) protein (170aa)
Phosphoribosyltransferase n=2 Tax=Acidovorax RepID=A1WBQ8_ACISJ
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ABM43683.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (stra
SCNpilot_solid_1_scaffold_115_114
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136278..137240
DNA (963bp) protein (321aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=643561 species="Bac
Aspartate carbamoyltransferase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9H5_ACIAP rbh
SCNpilot_solid_1_scaffold_115_115
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137308..138600
DNA (1293bp) protein (431aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1268622 species="Bacteria; Proteobacteria; Betap
Allantoinase (EC:3.5.2.5)
dihydroorotase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036DF162 rbh
SCNpilot_solid_1_scaffold_115_116
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138635..138982
DNA (348bp) protein (116aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
Arsenate reductase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF51_ACIET
arsenate reductase
SCNpilot_solid_1_scaffold_115_117
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138982..140043
DNA (1062bp) protein (354aa)
dihydroorotase, homodimeric type (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU00
Dihydroorotase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TS13_ALIDB
SCNpilot_solid_1_scaffold_115_118
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140187..141083
DNA (897bp) protein (299aa)
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036AFAB2 rbh
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ACM32068.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Aci
SCNpilot_solid_1_scaffold_115_119
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141186..141944
DNA (759bp) protein (253aa)
glutamate ABC transporter permease n=1 Tax=Brachymonas chironomi RepID=UPI00037F2F2E
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEB83066.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphi
Displaying items 91-120 of 240 in total

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