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SCNpilot_solid_1_scaffold_4925

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_4925_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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50..853
DNA (804bp) protein (268aa)
CzcC family heavy metal RND efflux outer membrane protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI5_ALIDB
czcc family heavy metal rnd efflux outer membrane protein
CzcC family heavy metal RND efflux outer membrane protein {ECO:0000313|EMBL:ADV00459.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliph
SCNpilot_solid_1_scaffold_4925_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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879..1262
DNA (384bp) protein (128aa)
Heavy metal RND efflux outer membrane protein, CzcC family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9S2_ALIDK
Czcc family heavy metal RND efflux outer membrane protein {ECO:0000313|EMBL:GAO21818.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicyclip
heavy metal RND efflux outer membrane protein, CzcC family
SCNpilot_solid_1_scaffold_4925_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1277..2398
DNA (1122bp) protein (374aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI4_ALIDB
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:GAO21819.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
efflux transporter, rnd family, mfp subunit
SCNpilot_solid_1_scaffold_4925_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2555..5332
DNA (2778bp) protein (926aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9S4_ALIDK
heavy metal efflux pump, czca family
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:GAO21820.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_solid_1_scaffold_4925_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5358..6281
DNA (924bp) protein (308aa)
Putative LysR family transcriptional regulator n=1 Tax=Acidovorax sp. NO-1 RepID=H0C090_9BURK rbh
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:EHL22006.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=
LysR family transcriptional regulator
SCNpilot_solid_1_scaffold_4925_6
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6281..6541
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C091_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL22007.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
putative lipoprotein
SCNpilot_solid_1_scaffold_4925_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6765..8762
DNA (1998bp) protein (666aa)
Conjugal transfer coupling protein TraG n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WC06_PSEAI
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:GAO26443.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
conjugal transfer protein TraG
SCNpilot_solid_1_scaffold_4925_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8759..9235
DNA (477bp) protein (159aa)
Hypothetical ribbon-helix-helix harboring protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XW90_RALSO
CopG/DNA-binding domain-containing protein {ECO:0000313|EMBL:GAO26444.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source
hypothetical protein
SCNpilot_solid_1_scaffold_4925_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9232..10281
DNA (1050bp) protein (350aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TV34_ALIDB
p-type conjugative transfer atpase trbb
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:ADV00566.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicyclip
SCNpilot_solid_1_scaffold_4925_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10278..10661
DNA (384bp) protein (128aa)
TrbC-like protein n=3 Tax=Pseudomonas aeruginosa RepID=U8YSE5_PSEAI
Type IV secretory pathway protein {ECO:0000313|EMBL:ACD39031.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
conjugal transfer TrbC transmembrane protein
SCNpilot_solid_1_scaffold_4925_11
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10691..10942
DNA (252bp) protein (84aa)
Conjugal transfer protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HVM0_PSEUO
putative conjugal transfer trbD transmembrane protein
Type IV secretory pathway, VirB3-like protein {ECO:0000313|EMBL:KCB37746.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source=
SCNpilot_solid_1_scaffold_4925_12
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10952..13243
DNA (2292bp) protein (764aa)
VirB4 family type IV secretion/conjugal transfer ATPase n=4 Tax=Pseudomonas aeruginosa RepID=N2D3B7_PSEAI
CagE, TrbE, VirB family, component of type IV transporter system {ECO:0000313|EMBL:KCV66865.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bo
type IV transport system protein VirB
SCNpilot_solid_1_scaffold_4925_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13240..13995
DNA (756bp) protein (252aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MII9_ACIET
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KIL06316.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas st
conjugal transfer protein Trbj
SCNpilot_solid_1_scaffold_4925_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14007..14468
DNA (462bp) protein (154aa)
Putative conjugal transfer protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTD8_STRMK
trbL; conjugal transfer protein TrbL
Putative conjugal transfer protein {ECO:0000313|EMBL:CAQ44835.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophom
Displaying 14 items

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