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SCNpilot_solid_1_scaffold_70_25

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 29155..29682

Top 3 Functional Annotations

Value Algorithm Source
class I cytochrome c id=5083485 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 181.0
  • Bit_score: 158
  • Evalue 8.40e-36
class I cytochrome c Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 180.0
  • Bit_score: 158
  • Evalue 1.20e-35
cytochrome c class i similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 171.0
  • Bit_score: 156
  • Evalue 6.90e-36

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGAGCCAGGAACACGAAGAGACAAACCACGGATTGATCAAGACACCCATGCAGACCTTGGTCGCGGCCGGGCTGGGTTTCGCTGCACCCGTGTTCATAATCATGGGGCTGGTGAGTTTTTATTCGTCCGGTACAAAGACCGGTGTGGGTGCCATTCCGACACCGCAAGCCTTGGAGCAGCGCATTCAGAAGGTTGGTGAATCCGAAGTGGGCGACCCTGCGAAGATTGCAGCAGCGGCGGCGGCCACACCGGTGGCAGCCGCCGCCGCGCCTGCGGCCGCGCCCGCCGCAGATGCCGGCAAGAAAATCTACGACACCACCTGCGTTGCCTGCCACGGTACCGGCGTGGCCAATGCGCCCAAATTCGGCGACAAGGAAGCCTGGGCACCGCGCTTGGCGGCTGGATTCGATGAAGTGCTCAAGATTGCCACCCAGGGCAAGGGAGGAATGCCTCCCAAAGGCGGATCCAGCGCCTCAGATGCCGACTTCAAGGCGGCGGTCGAATACCTGGTCAACTCCGCCAAATAG
PROTEIN sequence
Length: 176
MSQEHEETNHGLIKTPMQTLVAAGLGFAAPVFIIMGLVSFYSSGTKTGVGAIPTPQALEQRIQKVGESEVGDPAKIAAAAAATPVAAAAAPAAAPAADAGKKIYDTTCVACHGTGVANAPKFGDKEAWAPRLAAGFDEVLKIATQGKGGMPPKGGSSASDADFKAAVEYLVNSAK*