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SCNpilot_solid_1_scaffold_121_1

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(1..1785)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCJ4_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 610.0
  • Bit_score: 951
  • Evalue 3.80e-274
  • rbh
RNA polymerase sigma-710 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 610.0
  • Bit_score: 951
  • Evalue 1.10e-274
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 610.0
  • Bit_score: 951
  • Evalue 5.40e-274

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1785
ATGCCCGCTCGAAAATCCGCCATGCCCGCTGCCACTGCCGCCAAGGCCGGTGACACGCCCGCCGAAGAAAAGACGAAGAAATCCGCCGCCGCCAAGGAGGCCGCCGCGGAATCCGCCACCAGGAAGCGCGCCAGCAAAAAGGCTGACGCCGCCGCGGCCAAGCCTGCCAAGGCAGGAAAGGCAAGCGGCAAGGGCGCCGTGAAGGGCAAGGGCAAGAAGGGCGTGGAAGAAGACGATACCGACCTGTCGGATGTCGAAGCGGACCTGGAAGGCGAACCCGAAGCCGTAGAAGCCGCGGTTGAGACACCCGTCGAAAAGGTCAAGCCGCTGCGCATGAAGATCAGCAAGGCCAAGGAGCGGGCCTTGATGAAGGAATTCGGCCTGGATGAAACCATCCTTTCCGAAGAAGACATGGCCAAGCGCCGCGCCCAGCTCAAGAAGCTGATCACGCTGGGCAAGACGCGCGGCTACCTCACGCAGGGCGAAATTTCCGACCACCTGCCGGACAAGCTGGTGGACGCAGAAACCATGGAAGCCGTGGCCTCGCTGCTCAGCGACATGGGCGTGGCCATCTACGAACAGACCCCCGACGCCGAAACGCTGTTCCAGAACAACGTCACGCCCACGGCCACCACGGTCGAAGAGGCCGAGGAAGAAGCCGAAGCGGCGCTGTCCACCGTGGACAGCGAATTCGGCCGCACCACCGACCCGGTGCGCATGTACATGCGCGAGATGGGCACGGTGGAGCTGCTCACGCGCGAGGGCGAGATCGAGATCGCCAAGCGCATCGAGGGCGGCCTGATGGACATGATGGAGGCGATCAGCGCCTCGCCCGCGACCATCGCCGAGATCCTCAACATGGGCGAGGAAATCCGCGCCGGCAAGGTCGTCATCAACACGGTGGTCGATGGTTTTGCCGACCCTGAGGAAGCCGACGACTACGTGGCCGAGGAAGACTTCGACGAGTACGACGAAGAGGACGACGACGACGGCAAGGGCGGCTCCAAGGCGATGACGCGCCTGCTGGAAAAGCTCAAGGGCGATGCGATGGAGCGCTTTGACGAGCTGCGCGCGCACTTCGAGAAGATGCACAGGATCTACGACAAGGAGGGCTACGGCACGCCTGGGTACATGAAGGTGCAGCGCGAAATTTCATCCAAGCTGATGTCCATCCGCTTCACCGCCAAGACCATCGAAAAATTGTGCGACATGGTGCGCGCGCAGGTCGACGACGTGCGCAAGAAAGAGCGCGAACTGCGCCGCATCATCGTGGACAAGTGCGGCATGCCGCAGGAAACCTTCATCAAGGAATTCCCGCCCAACCTGCTGAACCTGCACTGGGTGGAAAAGCAGGCCGGCGCCGGCAAGCCCTGGAGCACCATCATGGGGCGCAACATCCCCCCGATCCAGGAACTGCAGCAGAACCTGATCGACCTGCAGACCCGCGTGGTCGTGCCGCTGCTGGAGCTCAAGGCCATCCACAAGCGCATGAACGACGGCGAGCGTGCCAGCCGCCATGCCAAGAAGGAAATGATCGAGGCCAACCTGCGCCTGGTCATCAGCATCGCCAAGAAGTACACCAACCGCGGCCTGCAGTTCCTCGATCTGATCCAGGAGGGCAACATCGGCCTGATGAAGGCGGTGGACAAGTTCGAATACCGCCGCGGCTACAAGTTCTCGACCTACGCCACCTGGTGGATCCGCCAGGCCATCACGCGCTCGATCGCCGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAGACCATCAACAAGATG
PROTEIN sequence
Length: 595
MPARKSAMPAATAAKAGDTPAEEKTKKSAAAKEAAAESATRKRASKKADAAAAKPAKAGKASGKGAVKGKGKKGVEEDDTDLSDVEADLEGEPEAVEAAVETPVEKVKPLRMKISKAKERALMKEFGLDETILSEEDMAKRRAQLKKLITLGKTRGYLTQGEISDHLPDKLVDAETMEAVASLLSDMGVAIYEQTPDAETLFQNNVTPTATTVEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLMDMMEAISASPATIAEILNMGEEIRAGKVVINTVVDGFADPEEADDYVAEEDFDEYDEEDDDDGKGGSKAMTRLLEKLKGDAMERFDELRAHFEKMHRIYDKEGYGTPGYMKVQREISSKLMSIRFTAKTIEKLCDMVRAQVDDVRKKERELRRIIVDKCGMPQETFIKEFPPNLLNLHWVEKQAGAGKPWSTIMGRNIPPIQELQQNLIDLQTRVVVPLLELKAIHKRMNDGERASRHAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKM