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SCNpilot_solid_1_scaffold_121_11

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 13516..14952

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 474.0
  • Bit_score: 756
  • Evalue 2.00e-215
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0K1_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 474.0
  • Bit_score: 756
  • Evalue 1.40e-215
  • rbh
RNA methyltransferase, trma family similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 474.0
  • Bit_score: 756
  • Evalue 4.10e-216

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
ATGAACGACGGCCCGAACAACGACCACGCGCACCTTCCCCCCGGCTGGCTTGAAATTACCTCCATGGACATGGAGGCGCAGGGCGTTGCGCACCGTGAGGACGGCAAGGTGGTGTTCGTCGACGGCGCCCTGCCGGGCGAATGGGTCGGCGCCGTCTCGCGCCGCAGCAAGAAGCAGTGGGAGCAGGCGGATTTGACCGAAATCCACCGCGAATCCAGCCAGCGGGTGCGGCCGCAGTGCCCGCACTTTGGTCTGCACGCGGGTGCCTGCGGCGGCTGCAAGATGCAGCATCTGGAGGCCTCGGCCCAGGTGGCGGCCAAGCAGCGCGTGCTGGAGGACAACCTCTGGCACCTGGGCAAGGTGCGGGCCGAAACCCTGCTGCCCGCCATCCACGGGCCCAGCTGGGGCTACCGCTACCGCGCGCGCCTGGCGGTGCGCCATGTGGTGAAGAAGGGCACCGTGCTGGTGGGCTTTCACGAGCGCAGGAGCCGCTACATCGCGGACATGCAGACCTGCAGGATTCTGCCGCCGCACGTTGATGCGCTGTTGATGCCGCTGCGCGCCCTGATAGCCGCGATGGCGGCGCGCGATACCTGCCCGCAGATCGAGCTGGCCTGCGGCGACGCCGTGACGGTGCTGGTGCTGCGCCATCTGGAACCGCTGGCCGATGCGGATCTGCAACTGCTGCGCGCCTTTGCGCAGCAGCATGGCGTGCAATGGTGGCTGCAGCCCAAGGGGCCGGACAGCGTGCATCCGCTTCAGGCGGACGGCGTGCCGCTCAGCTACAGCCTGCCGGAATTCGGCATCACGATCGCCTTCAGGCCGACCGATTTCACGCAGGTCAACCCGCACATCAACCGGGTGCTGGTGGGCCGTGCACTGCGCCTGCTGGCGCCGCGCAAGACCGACCGTGTGATCGACTGGTTCTGCGGCCTGGGCAATTTCACGCTGCCGATCGCCACGCGCGCGGGCAAGGTGCTGGGCGTGGAGGGCAGCCGCGCATTGATTGCCAGGGCCAGGGAAAATTTTGATAGAAATCAGGCAACAGCGCATGCGGGACAAGCGCTTGCAGCTACTGAATTTGAAGTTTCCAACCTCTTTGAAATCACGGTGCAGGCGCTGGTGGCGGATGGCAGCGCCCAGCGCTGGCTGATCGATCCGCCGCGCGAGGGCGCGTTTGCGCTGGTGAAAGCGCTGGCCGACATCCATCAGGCGCGCACAGGCGCCGAGGGCGCTGCCGCGTTGCCGCCCGAGGCGCAGCCATGGCGGCCGCCCGAGCGCATCGTCTACGTGAGCTGCAACCCGGCGACGCTGGCGCGCGATGCCGGTCTGCTGGTGCACCAGGCGGGCTATCGCTGCACGGCGGCAGGGGTGATCAACATGTTTCCGCATACCGCGCATGTGGAGAGCATGGCGGTGTTCGAGCGAGCCGCGTGA
PROTEIN sequence
Length: 479
MNDGPNNDHAHLPPGWLEITSMDMEAQGVAHREDGKVVFVDGALPGEWVGAVSRRSKKQWEQADLTEIHRESSQRVRPQCPHFGLHAGACGGCKMQHLEASAQVAAKQRVLEDNLWHLGKVRAETLLPAIHGPSWGYRYRARLAVRHVVKKGTVLVGFHERRSRYIADMQTCRILPPHVDALLMPLRALIAAMAARDTCPQIELACGDAVTVLVLRHLEPLADADLQLLRAFAQQHGVQWWLQPKGPDSVHPLQADGVPLSYSLPEFGITIAFRPTDFTQVNPHINRVLVGRALRLLAPRKTDRVIDWFCGLGNFTLPIATRAGKVLGVEGSRALIARARENFDRNQATAHAGQALAATEFEVSNLFEITVQALVADGSAQRWLIDPPREGAFALVKALADIHQARTGAEGAAALPPEAQPWRPPERIVYVSCNPATLARDAGLLVHQAGYRCTAAGVINMFPHTAHVESMAVFERAA*