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SCNpilot_solid_1_scaffold_121_30

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(30670..30909)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=2 Tax=Comamonadaceae RepID=A1W4L1_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 94.0
  • Bit_score: 138
  • Evalue 4.10e-30
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 94.0
  • Bit_score: 138
  • Evalue 1.10e-30
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABM56253.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Vermine similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 94.0
  • Bit_score: 138
  • Evalue 5.70e-30

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Taxonomy

Verminephrobacter eiseniae → Verminephrobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGAGCACCGCATTCGACAGCATCAAGCAAGGTCTTCAAGAGGCCATCTTTCACGCCCAGGACGACGAGCGCGGCGTGCGCGTGCACCGTCCGCGCGCCATCGACGTGAAGGCCGTGCGCGCCAAGGTGGGCATGACGCAGGAACCATTTGCCGCCCGTTTTGGCTTTTCCACGGCCACCCTGCGGCACTGGGAACGCGGGGATCGCAACCCGCGGGCGGTCATCGAGGCGTTGGCGTGA
PROTEIN sequence
Length: 80
MSTAFDSIKQGLQEAIFHAQDDERGVRVHRPRAIDVKAVRAKVGMTQEPFAARFGFSTATLRHWERGDRNPRAVIEALA*