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SCNpilot_solid_1_scaffold_34

Search features with annotation key words

Displaying items 61-90 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_34_61
unknown

Not on your lists

63256..63429
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_34_62
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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63442..65664
DNA (2223bp) protein (741aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
phosphoribosylglycinamide synthetase n=1 Tax=Segetibacter koreensis RepID=UPI00036CDD10 rbh
phosphoribosylformylglycinamidine synthase subunit II
SCNpilot_solid_1_scaffold_34_63
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

65645..66454
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000375116C
Uncharacterized protein {ECO:0000313|EMBL:KIC91529.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_34_64
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(66690..67760)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367065B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98540.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_34_65
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

67885..69813
DNA (1929bp) protein (643aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU4_NIAKG rbh
threonyl-tRNA synthetase
SCNpilot_solid_1_scaffold_34_66
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

70011..70595
DNA (585bp) protein (195aa)
Translation initiation factor IF-3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU3_NIAKG rbh
translation initiation factor 3 (bIF-3)
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagace
SCNpilot_solid_1_scaffold_34_67
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

70803..72719
DNA (1917bp) protein (639aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLJ7_NIAKG
Flagellar motor protein MotB {ECO:0000313|EMBL:KIC93227.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
OmpA/MotB domain-containing protein
SCNpilot_solid_1_scaffold_34_68
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

72822..74357
DNA (1536bp) protein (512aa)
alpha amylase (EC:3.2.1.1) Tax=GWD1_Spirochaetes_27_9_curated
Alpha amylase id=4591405 bin=GWA2_Flavobacterium_35_26 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Alpha amylase, catalytic region
SCNpilot_solid_1_scaffold_34_69
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

74585..75988
DNA (1404bp) protein (468aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDQ6_NIAKG rbh
Putative ribonuclease {ECO:0000313|EMBL:GAO44780.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter
RNA-metabolising metallo-beta-lactamase rbh
SCNpilot_solid_1_scaffold_34_70
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

76206..79532
DNA (3327bp) protein (1109aa)
Protein translocase subunit SecA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLJ5_NIAKG rbh
protein translocase subunit secA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
SCNpilot_solid_1_scaffold_34_71
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

79635..80300
DNA (666bp) protein (222aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
Deoxyribose-phosphate aldolase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPJ3_9SPHI
SCNpilot_solid_1_scaffold_34_72
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

80409..80876
DNA (468bp) protein (156aa)
Sporulation domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLI5_NIAKG
sporulation domain-containing protein
Sporulation domain protein {ECO:0000313|EMBL:AEV96554.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source=
SCNpilot_solid_1_scaffold_34_73
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(80896..81579)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8T1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01261.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_34_74
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(81677..82054)
DNA (378bp) protein (126aa)
Putative uncharacterized protein id=2986114 bin=GWF2_Bacteroidetes_33_38 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_solid_1_scaffold_34_75
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(82051..82395)
DNA (345bp) protein (115aa)
Putative uncharacterized protein id=1866767 bin=GWA2_Bacteroidetes_42_15 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
SCNpilot_solid_1_scaffold_34_76
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(82459..82734)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003649157
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
SCNpilot_solid_1_scaffold_34_77
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(83079..83807)
DNA (729bp) protein (243aa)
NUDIX hydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7L5_NIAKG
NUDIX hydrolase Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
NUDIX hydrolase
SCNpilot_solid_1_scaffold_34_78
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(84026..84514)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDQ7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01507.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_34_79
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(84558..86162)
DNA (1605bp) protein (535aa)
Peptidase C1A papain n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ92_9SPHI
Peptidase C1 family protein {ECO:0000313|EMBL:GAO44782.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumib
peptidase C1
SCNpilot_solid_1_scaffold_34_80
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(86200..88140)
DNA (1941bp) protein (647aa)
Protein-disulfide reductase {ECO:0000313|EMBL:AEW03564.1}; EC=1.8.1.8 {ECO:0000313|EMBL:AEW03564.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteri
Protein-disulfide reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE16_NIAKG rbh
Protein-disulfide reductase
SCNpilot_solid_1_scaffold_34_81
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(88331..89119)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037673B7
condensin subunit ScpA; K05896 segregation and condensation protein A Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
condensin subunit ScpA
SCNpilot_solid_1_scaffold_34_82
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(89201..90205)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00038007C4 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU57884.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
SCNpilot_solid_1_scaffold_34_83
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(90271..90639)
DNA (369bp) protein (123aa)
large-conductance mechanosensitive channel n=1 Tax=Capnocytophaga cynodegmi RepID=UPI00036F7F71
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacte
large conductance mechanosensitive channel protein
SCNpilot_solid_1_scaffold_34_84
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(90772..91518)
DNA (747bp) protein (249aa)
Polyphosphate:AMP phosphotransferase {ECO:0000313|EMBL:AEW01935.1}; EC=2.7.4.- {ECO:0000313|EMBL:AEW01935.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chit
Polyphosphate:AMP phosphotransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL94_NIAKG
Polyphosphate:AMP phosphotransferase
SCNpilot_solid_1_scaffold_34_85
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(91611..92174)
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL96_NIAKG
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1349421 species="Bacteria;
ribosome recycling factor
SCNpilot_solid_1_scaffold_34_86
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(92237..93370)
DNA (1134bp) protein (378aa)
Glycosyl transferase, family 4, conserved region-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL97_NIAKG rbh
Glycosyl transferase, family 4, conserved region-containing protein
Glycosyl transferase, family 4, conserved region-containing protein {ECO:0000313|EMBL:AEW01938.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
SCNpilot_solid_1_scaffold_34_87
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

93601..94434
DNA (834bp) protein (278aa)
Transketolase {ECO:0000313|EMBL:AEW01939.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AEW01939.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella
transketolase n=1 Tax=Niabella aurantiaca RepID=UPI000365132C rbh
transketolase rbh
SCNpilot_solid_1_scaffold_34_88
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

94775..96802
DNA (2028bp) protein (676aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037DCD20 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD57587.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_solid_1_scaffold_34_89
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(96834..97424)
DNA (591bp) protein (197aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X7_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW02334.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
SCNpilot_solid_1_scaffold_34_90
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

97676..98764
DNA (1089bp) protein (363aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X6_NIAKG
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW02333.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
Displaying items 61-90 of 126 in total

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