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SCNpilot_solid_1_scaffold_104

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_104_1
unknown

Not on your lists

comp(124..423)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_104_2
unknown

Not on your lists

comp(1066..1434)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_104_3
unknown

Not on your lists

comp(1631..2098)
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_104_4
unknown

Not on your lists

comp(2338..2727)
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_104_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2728..5346)
DNA (2619bp) protein (873aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFH6_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61681.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
SCNpilot_solid_1_scaffold_104_6
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5417..7513)
DNA (2097bp) protein (699aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037856D5
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:CDD97349.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
SCNpilot_solid_1_scaffold_104_7
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7531..8175)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTS0_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06645.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source=
SCNpilot_solid_1_scaffold_104_8
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8184..8723)
DNA (540bp) protein (180aa)
glutathione peroxidase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000314F31C
glutathione peroxidase family protein
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
SCNpilot_solid_1_scaffold_104_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8732..10006)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDE3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99383.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_104_10
unknown

Not on your lists

comp(10117..10242)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_104_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10504..12465)
DNA (1962bp) protein (654aa)
Probable potassium transport system protein kup n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE11_NIAKG
Low affinity potassium transport system protein kup; K03549 KUP system potassium uptake protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Low affinity potassium transport system protein kup
SCNpilot_solid_1_scaffold_104_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12691..14220
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FC872 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03560.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_104_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14232..15224
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE13_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92769.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_104_14
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15337..16785
DNA (1449bp) protein (483aa)
oxidoreductase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003709FF9 rbh
Putative dehydrogenase {ECO:0000313|EMBL:EON78773.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacter
oxidoreductase domain-containing protein
SCNpilot_solid_1_scaffold_104_15
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17147..17908)
DNA (762bp) protein (254aa)
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1C7_PEDHD
hypothetical protein
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain {ECO:0000313|EMBL:ACU02903.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
SCNpilot_solid_1_scaffold_104_16
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17934..19094)
DNA (1161bp) protein (387aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1C6_PEDHD rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU02902.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedob
SCNpilot_solid_1_scaffold_104_17
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19095..20042)
DNA (948bp) protein (316aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2] Tax=RBG_13_Bacteroidetes_43_22_curated
ROK family transcriptional regulator
ROK family protein id=4724864 bin=GWC2_Bacteroidetes_40_22 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes rbh
SCNpilot_solid_1_scaffold_104_18
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20251..22083)
DNA (1833bp) protein (611aa)
glycan metabolism protein RagB n=1 Tax=Pedobacter agri RepID=UPI000299D498 rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ACU06329.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepar
SCNpilot_solid_1_scaffold_104_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22095..25520)
DNA (3426bp) protein (1142aa)
TonB-dependent receptor n=1 Tax=Pedobacter agri RepID=UPI000299D66F rbh
TonB-dependent receptor {ECO:0000313|EMBL:AHF16810.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
TonB-dependent receptor
SCNpilot_solid_1_scaffold_104_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25790..26599)
DNA (810bp) protein (270aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|SAAS:SAAS00085795}; EC=4.2.1.126 {ECO:0000256|SAAS:SAAS00085795};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacter
Glucokinase regulatory-like protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPX4_CHIPD rbh
murQ; N-acetylmuramic acid 6-phosphate etherase
SCNpilot_solid_1_scaffold_104_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26951..27634
DNA (684bp) protein (228aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:000025
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE14_NIAKG
phosphoribosylformylglycinamidine synthase subunit I
SCNpilot_solid_1_scaffold_104_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27705..28166
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE15_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC92767.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
SCNpilot_solid_1_scaffold_104_23
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28249..28830)
DNA (582bp) protein (194aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE18_NIAKG
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO44916.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;"
RNA polymerase, sigma subunit, ECF family
SCNpilot_solid_1_scaffold_104_24
unknown

Not on your lists

comp(28896..29039)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_104_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29149..31989
DNA (2841bp) protein (947aa)
Excinuclease ABC, A subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE19_NIAKG rbh
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis
excinuclease ABC subunit A
SCNpilot_solid_1_scaffold_104_26
unknown

Not on your lists

comp(32286..32537)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_104_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32528..32818)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWT8_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96838.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
SCNpilot_solid_1_scaffold_104_28
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33136..34674
DNA (1539bp) protein (513aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9W0_NIAKG
GMP synthase
SCNpilot_solid_1_scaffold_104_29
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34700..35878
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ18_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC90401.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_104_30
unknown

Not on your lists

comp(35861..36055)
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying items 1-30 of 78 in total

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