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SCNpilot_solid_1_scaffold_234

Search features with annotation key words

Displaying items 31-59 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_234_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33181..34341)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366F2EF rbh
Putative acetyltransferase {ECO:0000313|EMBL:GAO43956.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumiba
hexapeptide transferase family protein
SCNpilot_solid_1_scaffold_234_31
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(34453..34701)
DNA (249bp) protein (83aa)
50S ribosomal protein L31 type B n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THT0_NIAKG
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagacea
50S ribosomal protein L31
SCNpilot_solid_1_scaffold_234_32
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34788..35540)
DNA (753bp) protein (251aa)
Integral membrane protein TerC n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XXB4_PEDHD rbh
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ACU06420.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter
SCNpilot_solid_1_scaffold_234_33
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35674..36435)
DNA (762bp) protein (254aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=700598 species=
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003680FCD
hypothetical protein
SCNpilot_solid_1_scaffold_234_34
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36567..37913
DNA (1347bp) protein (449aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDZ8_CHIPD rbh
adenylosuccinate lyase
SCNpilot_solid_1_scaffold_234_35
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37917..38327)
DNA (411bp) protein (137aa)
Uncharacterized protein family UPF0310 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFH5_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO45636.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_234_36
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38484..39203)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUX2_CHIPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU62881.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
SCNpilot_solid_1_scaffold_234_37
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39233..39736)
DNA (504bp) protein (168aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFF1_NIAKG
6,7-dimethyl-8-ribityllumazine synthase
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
SCNpilot_solid_1_scaffold_234_38
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40004..40684)
DNA (681bp) protein (227aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFF0_NIAKG
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AEV98381.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sou
SCNpilot_solid_1_scaffold_234_39
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40728..41672)
DNA (945bp) protein (315aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphing
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUX5_CHIPD
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
SCNpilot_solid_1_scaffold_234_40
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41864..42946
DNA (1083bp) protein (361aa)
DNA replication and repair protein RecF n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFE8_NIAKG rbh
DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinoph
SCNpilot_solid_1_scaffold_234_41
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42950..43822)
DNA (873bp) protein (291aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriacea
Cysteine synthase B n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDA0_9SPHI
cysteine synthase B
SCNpilot_solid_1_scaffold_234_42
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43822..44640)
DNA (819bp) protein (273aa)
Serine acetyltransferase {ECO:0000313|EMBL:EOR93438.1}; EC=2.3.1.30 {ECO:0000313|EMBL:EOR93438.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteri
Serine acetyltransferase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNY7_9SPHI
serine O-acetyltransferase
SCNpilot_solid_1_scaffold_234_43
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

44932..45738
DNA (807bp) protein (269aa)
fatty acid desaturase; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D68E7 rbh
fatty acid desaturase
SCNpilot_solid_1_scaffold_234_44
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45763..46692)
DNA (930bp) protein (310aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGR7_NIAKG
lipoyl synthase
SCNpilot_solid_1_scaffold_234_45
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46736..47554)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGR8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93832.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_234_46
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47605..48024
DNA (420bp) protein (140aa)
OsmC family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGR9_NIAKG
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:AEV98511.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (stra
SCNpilot_solid_1_scaffold_234_47
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48106..49380)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036560A6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF14806.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
SCNpilot_solid_1_scaffold_234_48
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

49612..50829
DNA (1218bp) protein (406aa)
Transposase IS4 family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFA8_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:ETZ21578.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
transposase IS4 family protein
SCNpilot_solid_1_scaffold_234_49
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(50959..51537)
DNA (579bp) protein (193aa)
Maf-like protein Niako_1626 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T844_NIAKG
Septum formation protein Maf
Maf-like protein Niako_1626 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kor
SCNpilot_solid_1_scaffold_234_50
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51534..52496)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366A194 rbh
Ubiquinone biosynthesis protein UbiA {ECO:0000313|EMBL:KIC91827.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="F
UbiA prenyltransferase
SCNpilot_solid_1_scaffold_234_51
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52549..53334)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQY3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97882.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_234_52
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

53395..54237
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F7328
Uncharacterized protein {ECO:0000313|EMBL:KIC93841.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_234_53
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

54311..56653
DNA (2343bp) protein (781aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000256|RuleBase:RU000518};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=13494
DNA topoisomerase 1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC68_CHIPD rbh
DNA topoisomerase I
SCNpilot_solid_1_scaffold_234_54
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

56682..57941
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003745806
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
SCNpilot_solid_1_scaffold_234_55
unknown

Not on your lists

58082..58399
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_234_56
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


58452..59510
DNA (1059bp) protein (353aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NP58_9SPHI
O-sialoglycoprotein endopeptidase
SCNpilot_solid_1_scaffold_234_57
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59540..60790)
DNA (1251bp) protein (417aa)
GTP-binding protein Der n=1 Tax=Segetibacter koreensis RepID=UPI00036E6C29
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacterii
GTP-binding protein engA
SCNpilot_solid_1_scaffold_234_58
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60939..61865)
DNA (927bp) protein (309aa)
GTPase Era n=1 Tax=Niabella aurantiaca RepID=UPI00035D1897 rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;"
era; GTPase Era
Displaying items 31-59 of 59 in total

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