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SCNpilot_solid_1_scaffold_36_93

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(128516..129115)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGS6_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 190.0
  • Bit_score: 228
  • Evalue 7.50e-57
Putative Xre family transcriptional regulator {ECO:0000313|EMBL:GAO44621.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 194.0
  • Bit_score: 270
  • Evalue 1.40e-69
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 190.0
  • Bit_score: 228
  • Evalue 2.10e-57

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 600
ATGCAGGAAGACGTACTCATCCAGATCAGTAATAAAATTAAAGAAACCCGGAAAACACAAAAAAAAACAGTACAGGAACTGGCCACCAAAGCCCAGGTAAGCAAGGGGTTGATCTCTCAAATTGAAAACAACCGTACAGTACCGTCCCTCCCGGTATTGATGAATATTGTTCTGGCATTGAACATTGATCTGAAGGACTTTTTTGAAGATATCAGTCACAGCAAAGAAGGGCAGCAAAAAGTTATTATCAAAAGTACGGCAGACTACCAGCCGTTTGAAAAAGAACCAGCCAAAGGCTTTAAATATAAAAGAATATTAACCCGCAATATGGATGGCGGGCCGGTAGATACTATTTTACTTGAATTGAAAAAAGGTGCACGACGCACACAAATGATTAAAACAGATGCTTACGAATATAAATATATTATTAAAGGAAGAGTAGAATACCAGATTGAAGAAGATAAATATGTACTGGAAGAAGGAGATTCACTTTTTTTTGACGGAAGACTTCCCCATAAACCATCTAACATCGGCAACACAGATGCACTGATGCTTGTTATATATTTCTTTATAACCGGAAGTAAAAATAATAACTTTTAA
PROTEIN sequence
Length: 200
MQEDVLIQISNKIKETRKTQKKTVQELATKAQVSKGLISQIENNRTVPSLPVLMNIVLALNIDLKDFFEDISHSKEGQQKVIIKSTADYQPFEKEPAKGFKYKRILTRNMDGGPVDTILLELKKGARRTQMIKTDAYEYKYIIKGRVEYQIEEDKYVLEEGDSLFFDGRLPHKPSNIGNTDALMLVIYFFITGSKNNNF*