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SCNpilot_solid_1_scaffold_43_127

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(134271..135710)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophaga similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 480.0
  • Bit_score: 746
  • Evalue 2.80e-212
RNA-splicing ligase RtcB n=1 Tax=Niabella soli DSM 19437 RepID=H1NTZ8_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 480.0
  • Bit_score: 746
  • Evalue 2.00e-212
  • rbh
protein rtcB similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 480.0
  • Bit_score: 746
  • Evalue 5.50e-213

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1440
ATGAGCAAATTAAAAATAACAGGAAAAGAATTACGCGCTACCGGCTACCCGCAGGGCCCGGTGATCAGCGTGGCAATGAATGTGATGCAGAAACATTACAAGCATCACACAAAAGAGAAAGTGATGGAAATATTGAAGCGTGTATTGGAAAGCCCGGTACAATATAAAGATGATGTCGTATTGGCAGTGATAGCGGAGCAATTATTGCCCAAAGCGCCAAAAGAGGACGCAACAATTTCATTGAACAACCAGGGTATTCCGTTCAATGTATTCGGACAGGAACACATTGAAGAAGGCGCCCTGCACCAGATGTATGTCGCGGCTAAATTGCCGGTGGCAGTTGCGGGCGCATTGATGCCTGATGCACACAGCGGTTATGGCTTGCCGATAGGCGGTGTTCTGGCAACGGATAACGCCGTGATACCGTATGGCGTGGGAGTGGACATTGGCTGCCGCATGTGCCTGAGTGTTTTCGATATCAATCCAAAAGAGCTTACGCAGCGGGAAACTTCTTTTGCAAGGGAATTAAATGAAGCCACCCTTTTTGGAAGCGGCGCACAGTTTGACCGGGCATCAGATCATGAAGTAATGGAACATGCCGCATTTTATGAAATGCCTTTGCTGAAAAGTTTGCACGAACGCGCATGGAAACAATTGGGATCTTCCGGAAGTGGCAATCATTTCGTGGAGTTTGGCATAGTGGATATTGCAGAAAAGGATCCGGTACTGGGCATTGAACCCGGAAGTTATGTGGGATTGTTATCGCATTCCGGTTCCAGGGCGCTGGGTGCTACTATTGCAAATCATTATACTAAAATTGCGATCAGCAAAAGACGTTTACCACAGGATGCAAAAAATCTGGCGTGGTTGAATATGGATGAAGAAGCAGGAATAGAATACTGGATCGCCATGAACCTGGCGGGTGATTATGCTTCTGCATGTCATCACATTATTCACGAAAAAATTTCGAAACAGTTAGGACGTAAACCTCTTAAGAGGATAGAGAATCACCACAACTTTGCATGGAAGGAACAATGGGAAGGTAAGGAGGTAATTGTACACCGTAAAGGCGCTACACCTGCCGGAAAGGATGTATTGGGCATCATTCCCGGCTCTATGACAGCGGATGGGTATATTGTAAAAGGGAAAGGCGAACCGGCGGCTGTTAACTCGGCTTCCCACGGCGCAGGAAGGTTGATGAGCCGTACCAGAGCAATGCAGTCCATTACCGAAAATGCATTGAAGCAGGAACTGAAAAAGCATAGCGTGAAGCTGATCGGCGGAGGGCTGGATGAAGCGCCTTTCGCCTATAAGGATATTCATGTGGTAATGCAAAGTCAGCGGCAGTTGGTAGATGTGGTGGGAAGATTCACTCCCAGAATCGTAAAAATGGACGGCGCAAAGCATAAAACATGGGGAAAGAAGACAAGAGAAATGTAG
PROTEIN sequence
Length: 480
MSKLKITGKELRATGYPQGPVISVAMNVMQKHYKHHTKEKVMEILKRVLESPVQYKDDVVLAVIAEQLLPKAPKEDATISLNNQGIPFNVFGQEHIEEGALHQMYVAAKLPVAVAGALMPDAHSGYGLPIGGVLATDNAVIPYGVGVDIGCRMCLSVFDINPKELTQRETSFARELNEATLFGSGAQFDRASDHEVMEHAAFYEMPLLKSLHERAWKQLGSSGSGNHFVEFGIVDIAEKDPVLGIEPGSYVGLLSHSGSRALGATIANHYTKIAISKRRLPQDAKNLAWLNMDEEAGIEYWIAMNLAGDYASACHHIIHEKISKQLGRKPLKRIENHHNFAWKEQWEGKEVIVHRKGATPAGKDVLGIIPGSMTADGYIVKGKGEPAAVNSASHGAGRLMSRTRAMQSITENALKQELKKHSVKLIGGGLDEAPFAYKDIHVVMQSQRQLVDVVGRFTPRIVKMDGAKHKTWGKKTREM*