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SCNpilot_solid_1_scaffold_211_33

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 37668..38300

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VLG2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 157.0
  • Bit_score: 152
  • Evalue 4.20e-34
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EPR71050.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 157.0
  • Bit_score: 152
  • Evalue 5.90e-34
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 29.3
  • Coverage: 167.0
  • Bit_score: 101
  • Evalue 2.40e-19

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Taxonomy

Cyclobacterium qasimii → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 633
TTGTCGCCGGTTGGTGGAGACGCCAACCGGGGCAGGCAGGTCTTCACCGCCCATGGGAAGAAAGCAATGCGACAATTTGAAATGCACCCCTCTAAAACACCTTGTGTTCCCTACAAAATAGAGTATTTTAGATTAGGGGTATACTGCTTTTTAGTTCAGTTTATTAAAAATAAAGATTTGGCTGAGGATCTGACGCAGGATGTGATCTTAAAGGTATGGTCAAAGTATGAAAGGATTTCTTCAGTAGCAGACATAGATAATTATATATTAAAGATGGCCAAACATCATGTCATTGATCATTTCAAAAAACTGGCCCGGGAAAAAATTTATCAGCAAGAGGTTTGGTACCATATGCAGAAAAGTACTAACCCCGTTGAAAGCAAATTGTTACAGAAATATATTGATTCCCGTCTGGACGCCATTGTAAAAGCCTTACCCGAGCGCCAGCAAGAAGTTTATATACTCAGTAAACGGGAAGGGCTTTCGCTGGATGAAATAGCGTCAACACTGGGAATTACCGTACGTACTGCCCGCAACCATTTGGGCCGGGCGCTTAAAGTAATCCAGAGAAGCATAAACAAAGATTCTTTCAGGCTTTGGATCCTTGCAGTGTTAGGCTATTTTATTGATTAA
PROTEIN sequence
Length: 211
LSPVGGDANRGRQVFTAHGKKAMRQFEMHPSKTPCVPYKIEYFRLGVYCFLVQFIKNKDLAEDLTQDVILKVWSKYERISSVADIDNYILKMAKHHVIDHFKKLAREKIYQQEVWYHMQKSTNPVESKLLQKYIDSRLDAIVKALPERQQEVYILSKREGLSLDEIASTLGITVRTARNHLGRALKVIQRSINKDSFRLWILAVLGYFID*