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SCNpilot_solid_1_scaffold_262_34

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 35384..35908

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C765_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 150.0
  • Bit_score: 211
  • Evalue 6.30e-52
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54476.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 131.0
  • Bit_score: 212
  • Evalue 4.00e-52
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 150.0
  • Bit_score: 211
  • Evalue 1.80e-52

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Taxonomy

Flavobacterium hibernum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 525
TTGATAAACCTGACGGCATTTTCCCTGCTGGCCTTTATTCCGCAGGATATCGCCCCGCTGCTTTTGGCGGTTTTGGAAGCCCCCGAAATGGAGCAAAAATATCTTTCCGACAGATCCACCGAGCAAAAGGTATACAGCGATTATCTTTATGCAAAACAGGCGTATGAAAGGATGGTAGATGCTTCCAAAACAACGGGAGCAGTAGCGGATATTGAATTAGACAGGGCTAAAAGTGCGATGGAGAGTGCAAAATCCGCTTATGATGCCTCTAAAGCGGGTACTGCCGGAGCTGCACAAGTACAACAATACCTCCGCATCACAGCCCCTTTTGACGTCATCATTGCCGGGCGGAACGTTTCGGTAGGCGCACTGGCAGATACAGGAGGTGATATGCCTTTGTTCACGATAGCACAGGGTAATAAGTTGCGCCTGACATTATCCCTGCCTGAAAAAGCACGCCGCATCAGTAAAAAAGGGAATGCCTGCTACGTTCACCGTGAGCTCGCAGCCGGGAAAAACATTTGA
PROTEIN sequence
Length: 175
LINLTAFSLLAFIPQDIAPLLLAVLEAPEMEQKYLSDRSTEQKVYSDYLYAKQAYERMVDASKTTGAVADIELDRAKSAMESAKSAYDASKAGTAGAAQVQQYLRITAPFDVIIAGRNVSVGALADTGGDMPLFTIAQGNKLRLTLSLPEKARRISKKGNACYVHRELAAGKNI*