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SCNpilot_solid_1_scaffold_700_9

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 7917..8453

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P2_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 177.0
  • Bit_score: 224
  • Evalue 9.70e-56
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 177.0
  • Bit_score: 225
  • Evalue 1.60e-56
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00235.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 177.0
  • Bit_score: 225
  • Evalue 7.90e-56

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 537
TTGGAGAATTATTATGCCGATGGTAATAATGAGTGGCTGGGTATACTGATGCAGCGATATACTTTGCTGCTTTACGGTGTGTGCATGAAATATTTAAAGCATGAGGAGGAAGCCAGGGACGCGGTACAGCAAATCTTTTTAAAGGCCATTTCAGAGTTACAAAAATATCCTGTTACCTATTTCAAAAGCTGGCTATATATGATAGCCCGTAACTACTGCCTCATGCAACTGAGAGATAAAGGGAAAACTCCTTTGCCTGTTACAGAAAAGATGATAGCCTCAGAACCGGATGAAAACAACAGTATGCTTCATCACCAGCAAAGAGACGCAACATTTTCTGCCCTGAATGAAGCCCTTGAAGAACTTAATGAGGATCAACAACAATGCATTATTCTTTTTTACCTTCAAAAAAAATCTTACCATGAAATAGCTTCATTAACGGGATACTCGCCTATGCAGGTTAAGAGTCATATTCAAAACGGGAAACGTAACCTGAAGATTATTATGGAGAAAAAAATGAAGGAAAATAAGGTGTGA
PROTEIN sequence
Length: 179
LENYYADGNNEWLGILMQRYTLLLYGVCMKYLKHEEEARDAVQQIFLKAISELQKYPVTYFKSWLYMIARNYCLMQLRDKGKTPLPVTEKMIASEPDENNSMLHHQQRDATFSALNEALEELNEDQQQCIILFYLQKKSYHEIASLTGYSPMQVKSHIQNGKRNLKIIMEKKMKENKV*