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SCNpilot_solid_1_scaffold_1745_8

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 12020..12598

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEI9_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 186.0
  • Bit_score: 160
  • Evalue 1.80e-36
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 186.0
  • Bit_score: 160
  • Evalue 5.20e-37
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADZ76684.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 186.0
  • Bit_score: 160
  • Evalue 2.60e-36

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Taxonomy

Sphingobacterium sp. 21 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGGAGGAAATACTAAAATATGAGGACTTCAATCTTTTCAGGCAGTTGGGAACACATTCCGGATCGGCTGAAGCGGCGCTGGCGGCTATTTATAAGGTTTTCAAAACCACGCTTGTCCTGTACATCAAAAACTACATCCGTAACAACGATGATCTTATTAAAGATGTTATTGCAGAAACCATGCTGGTATTGTGGACGCAACGGAAGGAAGCAGCCCAAAAAGAAAAACCTTTGTCCTGGTTGCTGACCATTGCCCACCATATAGCTATTGATAAAATAAGAGCGCAAAAGAAATATTATACGGAGCCGTTGGAAAACCATCTTTCCCTACCCGGGAACGACTATACAGCAAGAGAAACAGAGCGCAAAGAACTGGAGGCTTTTTTCAGGAAAGCTGTGGAAAAGCTGCCTCCACAGGAAAGAAACATACTGTTGCTGAGCAAAATAGAAGAACTGCCGCACAGGCAGATCGCTTTACAATTCGGGGTATCCGTACAAACAGTAAAAAACCAGTTGAACCGGTCTTTGAAAAAGATAAGACGCTATATGGAAGATGCCTTAAGCAGCTTTTTTATTTGA
PROTEIN sequence
Length: 193
MEEILKYEDFNLFRQLGTHSGSAEAALAAIYKVFKTTLVLYIKNYIRNNDDLIKDVIAETMLVLWTQRKEAAQKEKPLSWLLTIAHHIAIDKIRAQKKYYTEPLENHLSLPGNDYTARETERKELEAFFRKAVEKLPPQERNILLLSKIEELPHRQIALQFGVSVQTVKNQLNRSLKKIRRYMEDALSSFFI*