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SCNpilot_solid_1_scaffold_817_5

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(4840..5817)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUU2_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 324.0
  • Bit_score: 552
  • Evalue 3.70e-154
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 324.0
  • Bit_score: 552
  • Evalue 1.00e-154
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ACU05950.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 324.0
  • Bit_score: 552
  • Evalue 5.20e-154

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 978
ATGAAACATCTTACGATAATCGTGCCCAACGGGCAGAACAACCTGAGCAGCATCGTTGGCGCTTACAAAATATTTACAAGAGCCAATGCCTTCCAAAAGGAAGCGGGCAAAAAAGAATTGTTTAAAATCCAGTTGACCGGGCTTTCAAAAGAAGTTGACTTTTATGAAGGCCTGTTTACCGTGCATCCGCATACCCATATTTCAGCGATAGCCAAAACCGATCTCATCATTATTCCTTCTTTGAATCACAATTATCAAAAAGCGGTAAAGGCTAACCAACTGCTGATTGACTGGATAGAGAAACAATATAAAAACGGTGCGGAAATAGCGTGTATATGCACCGGTGCATTCATGCTTGCATCATCGGGTTTACTGAACGGAAAAACCTGTTCTACCCATTGGGCCGTTGCGGATGCTTTTAGAACGATGTTTCCCAAAGTGAATTTACAAACAGATAAACTGATCACCGACGAAAACGGGATATACACAAATGGCGGCGCTTATTCTTTTTTGAACCTGATGATTTACCTGGTAGAGAAATACTACAACAGGCAAACAGCCATTTTTTGTTCAAAGGTATTCCAGATCGAAATGGACAGGCAAAGTCAGTCGGCTTTCATCATATTTAAGGGACAGAAATTGCATAGCGACGAAATGGTAAAAAATGCACAGGCCTATATTGAAAGCAACATAGATGAAAAAATATCTGTTGAAAATTTGTCTTCAAGGTTTGCCGTTGGCAGGCGGAATTTTGACAGGAGGTTTATAAAGGCAACCGGAAACACGCCAATCGAATATACGCAAAGAGTAAAAATTGAATCGGCAAAAAAGGCTTTTGAAAGCACCCGCAAAACAATCAATGAAGTAATGTACGAAGTGGGTTATTCGGATGCAAAAGCGTTCCGGGAAGTGTTCAGAAAAATTACCGGAATGTCGCCATTGGAATACAGGGGCAAATACAATAAGGAAGCAATATAA
PROTEIN sequence
Length: 326
MKHLTIIVPNGQNNLSSIVGAYKIFTRANAFQKEAGKKELFKIQLTGLSKEVDFYEGLFTVHPHTHISAIAKTDLIIIPSLNHNYQKAVKANQLLIDWIEKQYKNGAEIACICTGAFMLASSGLLNGKTCSTHWAVADAFRTMFPKVNLQTDKLITDENGIYTNGGAYSFLNLMIYLVEKYYNRQTAIFCSKVFQIEMDRQSQSAFIIFKGQKLHSDEMVKNAQAYIESNIDEKISVENLSSRFAVGRRNFDRRFIKATGNTPIEYTQRVKIESAKKAFESTRKTINEVMYEVGYSDAKAFREVFRKITGMSPLEYRGKYNKEAI*