ggKbase home page

SCNpilot_solid_1_scaffold_20227_2

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(873..2414)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9W9_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 516.0
  • Bit_score: 751
  • Evalue 6.50e-214
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 516.0
  • Bit_score: 751
  • Evalue 1.80e-214
Integrase catalytic region {ECO:0000313|EMBL:ACU57544.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pi similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 516.0
  • Bit_score: 751
  • Evalue 9.20e-214

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1542
ATGGCCCAAAAACCTATAGCAATGGAACAATTAAAGCAAATTTTACAGCTCCATCAGGATGGCATTGGCATCCGCGAGATGGCTCGTAGGGTTGGCATAAGTCGTAACACCGTTCGTAAATACCTGGAAGTATTAAGTACCGGCGTATCGGATACCAGCGATAAAGAACTTGTCGAAGTTGCCTATAACAACGATAGCCTGTCTCATGATATGGAACGGTTGCAGCAGTTGATCACCCATTTTCAGTACGCCCGGAAAGAACTGGGTAAGACTGGTGTTACGCGACAAGTATTGTGGCGGGAATATATTCAGGAACATCCTGATGGCTATGTTTACAGCCATTATTGTCATCATCTCAGCCAATACCTGAAGAATAAGGATCTGGCTATGCACCTGGAGTATCAGCCAGGCGACATAACGATGATTGATTTCGCAGGTAAGAAATTGTCTTATATTGACCCGCCAACCGGCGAGCTAATCCCCTGCGATGTTTTCGTCACCATACTGCCCTTTAGTGGACTTATCTTCTGCCATGGTGTTCATACCCAACAGACCGTTGATTTGGCGCATTGCCTAAACTCGATGGTGAGGTTCTACCGAGGCGTAACGGCCACCATCCTGTGCGATAATTTTAAGACCGCTGTTACTCGTGCTGACCGCTATGAACCGATATTTACGGACTTATGCCTGCAACTTAGTGAGCATTATGGAACCACCTTTAGCGCGGCTCGTCCGTATTCTCCACGAGATAAGGCAATGGTCGAACGGGCGGTAAATATTGTTTACACCAATATATACGCTCCGCTGCGTAACCGGGAGTTTACCAGCCTGGAGGCCCTTAATACGGCAATCCGTGAACAGCTAATCCTGCTCAATAATAAACCCTATAAGAATACACCTTATAGCCGCTCTTATTTTTTTGAGCAGCAGGAACGTTCTTTTCTGAAACCACTTCCCCCGGAACCATTTACGCTTAAAAAGGTAACCCAGCTTACTGTTCAACGCAACTATCATATCCAGCTCACTGAAGACCGGCGTTATTACAGCGTTCCTTATCAATACGTAGGTAAAAAGGTAAAGGTGCTTTATGACAATCGTTCGGTAGAAGTATATCTTGATCAGGATCGCATTGCTTTACATCCGCGCCGCGCCGCTCAGCAGGCTTACACTACGCTGGCCGAACACATGCCCCCCAACCATGCCCGGATGCAGCAGATCAAAGGGTTTAACCGGGATGACCTGTTAGCACAGGCTTCCCGGATCGGTCAGGCAACCCATCAGGTAGCTTCGCTGATACTCCAAAATAGTATCTATATGGAACAGAACTATAAATCCTGTTTTGGGATGCTGATGCTACACAAAAAATACAGTCGGGAGCGGCTGGAAGCCGCTTGCATGCGCGCTATGCAGGGAAGCCGGGTCACTTACACCATGATAAAAAATATCCTGGAGAGAGGATTGGATAAACAACAGCCGCCATTGGCTGATCCCCCTGGCATACCTCCGCACGAGAATATCCGGGGTAAAGACTATTATCAATAA
PROTEIN sequence
Length: 514
MAQKPIAMEQLKQILQLHQDGIGIREMARRVGISRNTVRKYLEVLSTGVSDTSDKELVEVAYNNDSLSHDMERLQQLITHFQYARKELGKTGVTRQVLWREYIQEHPDGYVYSHYCHHLSQYLKNKDLAMHLEYQPGDITMIDFAGKKLSYIDPPTGELIPCDVFVTILPFSGLIFCHGVHTQQTVDLAHCLNSMVRFYRGVTATILCDNFKTAVTRADRYEPIFTDLCLQLSEHYGTTFSAARPYSPRDKAMVERAVNIVYTNIYAPLRNREFTSLEALNTAIREQLILLNNKPYKNTPYSRSYFFEQQERSFLKPLPPEPFTLKKVTQLTVQRNYHIQLTEDRRYYSVPYQYVGKKVKVLYDNRSVEVYLDQDRIALHPRRAAQQAYTTLAEHMPPNHARMQQIKGFNRDDLLAQASRIGQATHQVASLILQNSIYMEQNYKSCFGMLMLHKKYSRERLEAACMRAMQGSRVTYTMIKNILERGLDKQQPPLADPPGIPPHENIRGKDYYQ*