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SCNpilot_solid_1_scaffold_6989_4

Organism: SCNPILOT_SOLID_1_Amoebophilus_asiaticus_double_35_7.2

megabin RP 51 / 55 MC: 16 BSCG 51 / 51 MC: 19 ASCG 13 / 38 MC: 1
Location: comp(3835..4698)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU52_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 287.0
  • Bit_score: 547
  • Evalue 6.10e-153
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 287.0
  • Bit_score: 547
  • Evalue 1.70e-153
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACE05471.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 287.0
  • Bit_score: 547
  • Evalue 8.60e-153

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Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGAGACAGCTCAAAATAAGCAAGCAGATTACCAATCGCGAAAGCCAATCTTTAGATAAATATTTACAAGAAATTGGACGAGTAGACCTACTTACTCCAGAAGAAGAAGTAGAACTTGCAAAACGTATCAAGGCAGGCGATAAGATTGCGCTAGAACAGCTTACTAAAGCTAACTTACGATTCGTAGTCTCTGTGGCCAAGCAATACCAGAACCAAGGCCTGTCGTTGAGCGACCTAATTAATGAAGGCAATTTAGGACTCATTAAATCAGCTCAACGTTTTGACGAAACACGAGGATTTAAATTTATTTCCTATGCCGTGTGGTGGATTAGGCAATCTATTTTGCAAGCTTTGGCTGAGCAGTCCCGTATTGTACGTTTACCACTCAACAGAGTAGGTACCCTCAACAAGTTATCTAGAACGTTCTCACAACTTGAGCAAAAATATAAACGTGAACCAACTGCTGAAGAGCTGGCAGAAGAACTAGAGGTCACACCCGGTGAGATAAGTGATACCATGAAAATATCTGGACGTCATGTATCGGTAGATGCCCCTTTTGTACAAGGTGAAGAACATAGCTTGTTAGATGTGCTAGAAGATAACGATGAAGATAAACCGGATGATACGCTTATTGACGAATCTTTGTGCAAAGATATAGAGCGTGCTTTGGCATTGCTTACTGAGAGAGAAGCGGGTGTTATAAGTTATTACTTTGGTTTAAAAGGTACTAACCCAATGACACTAGAAGAAATAGGTAGCCGCTTTAACCTAACTCGTGAACGTGTACGTCAGATCAAGGAAAAGGCAATCAAAAAATTACGTCATATAGCAAGCAGCAAAACTTTAAAAAACTATTTAGGTTAA
PROTEIN sequence
Length: 288
MRQLKISKQITNRESQSLDKYLQEIGRVDLLTPEEEVELAKRIKAGDKIALEQLTKANLRFVVSVAKQYQNQGLSLSDLINEGNLGLIKSAQRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNRVGTLNKLSRTFSQLEQKYKREPTAEELAEELEVTPGEISDTMKISGRHVSVDAPFVQGEEHSLLDVLEDNDEDKPDDTLIDESLCKDIERALALLTEREAGVISYYFGLKGTNPMTLEEIGSRFNLTRERVRQIKEKAIKKLRHIASSKTLKNYLG*