ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_solid_1_scaffold_5235_6

Organism: SCNPILOT_SOLID_1_Amoebophilus_asiaticus_double_35_7.2

megabin RP 51 / 55 MC: 16 BSCG 51 / 51 MC: 19 ASCG 13 / 38 MC: 1
Location: comp(5887..6540)

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 217.0
  • Bit_score: 418
  • Evalue 4.60e-114
Endonuclease III n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES16_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 217.0
  • Bit_score: 418
  • Evalue 3.30e-114
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 217.0
  • Bit_score: 418
  • Evalue 9.20e-115
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 654
ATGACACAAGAAGAACGTTATAATGCAGTTATAGCTTACTTTACTAGAGAACCTGAAATTAAAACAGAGCTACATTATGAGAATGCTTTTCAGTTAATGATTGCGGTTGTTTTAAGTGCACAATGTACAGACAAGCGCGTTAATCTAGTAACTCCTCAACTTTTTGAAGCATTTCCTACACCTGTAGAACTAGCTCACAGTAACTTTGAAGAAATTTTTCCCTACATCAAATCCATTTCTTATCCAAACAATAAAACCAAATACTTGATTAAAGCTGCACAAGACATTGTAGAGAAATTCCAAGGGCAAGTTCCAGAAGATGTAGAATCTTTAAAAACTTTAGCTGGAGTAGGCAGAAAATCAGCTCATGTTATCGCTGCTGTTTTATATAATATGCCTACCTTAGGCGTAGATACCCATGTAATGCGTGTTTCCAAAAGAATAGGGTTAGTAGATGATAAAGCAAAAACACCTCTTGCCATAGAAAAACAGCTAGTACAAAACCTGTCTGAAACATATATAGGCAAGCTCAACCATTGGCTTGTTATACATGGAAGGTATACCTGCTTAGCTCGAAAACCAAAGTGTAGCTCATGCGCACTTACTACCTATTGCCTTTATTTTAACACCCATCACAACAAAGCTGCTATATAA
PROTEIN sequence
Length: 218
MTQEERYNAVIAYFTREPEIKTELHYENAFQLMIAVVLSAQCTDKRVNLVTPQLFEAFPTPVELAHSNFEEIFPYIKSISYPNNKTKYLIKAAQDIVEKFQGQVPEDVESLKTLAGVGRKSAHVIAAVLYNMPTLGVDTHVMRVSKRIGLVDDKAKTPLAIEKQLVQNLSETYIGKLNHWLVIHGRYTCLARKPKCSSCALTTYCLYFNTHHNKAAI*