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SCNpilot_solid_1_scaffold_77

Search features with annotation key words

Displaying items 31-60 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_77_31
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35021..35548)
DNA (528bp) protein (176aa)
Putative integral membrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMT0_PUSST
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter {ECO:0000313|EMBL:CDM22741.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
SCNpilot_solid_1_scaffold_77_32
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35824..37602
DNA (1779bp) protein (593aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591, ECO:0000313|EMBL:CDM22743.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Bu
Acetolactate synthase large subunit (EC:2.2.1.6) rbh
Acetolactate synthase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMT2_PUSST rbh
SCNpilot_solid_1_scaffold_77_33
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37642..39099)
DNA (1458bp) protein (486aa)
Aldehyde dehydrogenase (EC:1.2.1.3) rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:CDM22745.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CDM22745.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; C
Aldehyde dehydrogenase n=1 Tax=Pseudomonas sp. Ag1 RepID=J0PMN6_9PSED rbh
SCNpilot_solid_1_scaffold_77_34
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39176..40255)
DNA (1080bp) protein (360aa)
Tartrate dehydrogenase / Tartrate decarboxylase / D-malic enzyme (EC:1.1.1.83 1.1.1.93 4.1.1.73) rbh
Tartrate dehydrogenase / Tartrate decarboxylase / D-malic enzyme {ECO:0000313|EMBL:CDM22746.1}; EC=1.1.1.83 {ECO:0000313|EMBL:CDM22746.1};; EC=1.1.1.93 {ECO:0000313|EMBL:CDM22746.1};; EC=4.1.1.73 {ECO
tartrate dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00036AD9E2 rbh
SCNpilot_solid_1_scaffold_77_35
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40381..41175)
DNA (795bp) protein (265aa)
2-keto-4-pentenoate hydratase-like protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12G21_POLSJ rbh
2-keto-4-pentenoate hydratase
2-keto-4-pentenoate hydratase-like protein {ECO:0000313|EMBL:ABE42521.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Po
SCNpilot_solid_1_scaffold_77_36
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41235..42644)
DNA (1410bp) protein (470aa)
Amidase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12G23_POLSJ rbh
amidase
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_solid_1_scaffold_77_37
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42661..43953)
DNA (1293bp) protein (431aa)
TRAP dicarboxylate transporter, permease protein DctM n=1 Tax=Variovorax paradoxus B4 RepID=T1X4I8_VARPD rbh
dctM1; TRAP dicarboxylate transporter, permease protein DctM
TRAP dicarboxylate transporter, permease protein DctM {ECO:0000313|EMBL:AGU47249.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
SCNpilot_solid_1_scaffold_77_38
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43956..44636)
DNA (681bp) protein (227aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW78_VARPS
tripartite ATP-independent periplasmic transporter DctQ component
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ACS16776.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
SCNpilot_solid_1_scaffold_77_39
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44633..45676)
DNA (1044bp) protein (348aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12G26_POLSJ rbh
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:ABE42516.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polar
SCNpilot_solid_1_scaffold_77_40
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45749..47020)
DNA (1272bp) protein (424aa)
aminotransferase class-V (EC:2.6.1.3)
Aminotransferase class-V n=2 Tax=Burkholderiaceae RepID=Q0K213_CUPNH rbh
Aminotransferase class-V {ECO:0000313|EMBL:EON16665.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3
SCNpilot_solid_1_scaffold_77_41
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47163..47858
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371FE97
Transcriptional regulator {ECO:0000313|EMBL:GAD24436.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S
GntR family transcriptional regulator
SCNpilot_solid_1_scaffold_77_42
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48074..49054
DNA (981bp) protein (327aa)
Putative periplasmic substrate-binding transport protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMT5_PUSST rbh
TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein rbh
TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein {ECO:0000313|EMBL:CDM22748.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
SCNpilot_solid_1_scaffold_77_43
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49058..49546
DNA (489bp) protein (163aa)
Putative inner membrane transport protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMT6_PUSST
TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter {ECO:0000313|EMBL:CDM22749.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
SCNpilot_solid_1_scaffold_77_44
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49556..50833
DNA (1278bp) protein (426aa)
Putative inner membrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMT7_PUSST rbh
TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter rbh
TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter {ECO:0000313|EMBL:CDM22750.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
SCNpilot_solid_1_scaffold_77_45
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50927..51934)
DNA (1008bp) protein (336aa)
TRAP dicarboxylate transporter subunit DctP n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KUG3_9BURK rbh
TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein rbh
TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein {ECO:0000313|EMBL:CDM22751.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
SCNpilot_solid_1_scaffold_77_46
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51988..53268)
DNA (1281bp) protein (427aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TQX5_ACIAC rbh
TRAP-type C4-dicarboxylate transport system, large permease component rbh
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:CDM22752.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
SCNpilot_solid_1_scaffold_77_47
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53281..53751)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036DD35D
Tripartite ATP-independent periplasmic transporter, DctQ component
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:CDM22753.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
SCNpilot_solid_1_scaffold_77_48
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53738..54232)
DNA (495bp) protein (165aa)
Gluconokinase (EC:2.7.1.12)
Gluconokinase {ECO:0000313|EMBL:CDM22754.1}; EC=2.7.1.12 {ECO:0000313|EMBL:CDM22754.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellan
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI00031E3A4A
SCNpilot_solid_1_scaffold_77_49
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54410..55468
DNA (1059bp) protein (353aa)
Transcriptional regulator, LacI family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VI95_POLNA rbh
Gluconate utilization system Gnt-I transcriptional repressor rbh
Gluconate utilization system Gnt-I transcriptional repressor {ECO:0000313|EMBL:CDM22755.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_77_50
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55534..58209)
DNA (2676bp) protein (892aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000313|EMBL:CDM22756.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
DNA topoisomerase III (EC:5.99.1.2) rbh
DNA topoisomerase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMT8_PUSST rbh
SCNpilot_solid_1_scaffold_77_51
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58274..60811
DNA (2538bp) protein (846aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMT9_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEC21562.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
SCNpilot_solid_1_scaffold_77_52
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60881..61843)
DNA (963bp) protein (321aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0
glutamyl-Q tRNA(Asp) ligase n=1 Tax=Bordetella holmesii RepID=UPI0003066948 rbh
glutamyl-Q-tRNA synthetase rbh
SCNpilot_solid_1_scaffold_77_53
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61874..62341)
DNA (468bp) protein (156aa)
Protein Smg homolog n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMU1_PUSST
hypothetical protein
Protein Smg homolog {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_77_54
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62478..64541)
DNA (2064bp) protein (688aa)
Methylcrotonyl-CoA carboxylase biotin-containing subunit {ECO:0000313|EMBL:CDM22776.1}; EC=6.4.1.4 {ECO:0000313|EMBL:CDM22776.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria;
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC:6.4.1.4) rbh
UPI0003D5BB71 related cluster n=1 Tax=unknown RepID=UPI0003D5BB71 rbh
SCNpilot_solid_1_scaffold_77_55
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64552..66153)
DNA (1602bp) protein (534aa)
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit {ECO:0000313|EMBL:CDM22777.1}; EC=6.4.1.4 {ECO:0000313|EMBL:CDM22777.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteri
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC:6.4.1.4) rbh
Putative methylcrotonyl-CoA carboxylase subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMU3_PUSST rbh
SCNpilot_solid_1_scaffold_77_56
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66263..67444)
DNA (1182bp) protein (394aa)
3-ketoacyl-CoA thiolase (EC:2.3.1.16) rbh
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:CDM22778.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CDM22778.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
Acetyl-CoA acetyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMU4_PUSST rbh
SCNpilot_solid_1_scaffold_77_57
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67454..69310)
DNA (1857bp) protein (619aa)
Isocitrate dehydrogenase phosphatase / kinase (EC:2.7.11.5) rbh
isocitrate dehydrogenase n=1 Tax=Pusillimonas noertemannii RepID=UPI0003045E12 rbh
Isocitrate dehydrogenase kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063056}; Short=IDH kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747};; Short=IDHK/P {ECO:0000256
SCNpilot_solid_1_scaffold_77_58
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69315..70493)
DNA (1179bp) protein (393aa)
Isovaleryl-CoA dehydrogenase (EC:1.3.8.4) rbh
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:CDM22780.1}; EC=1.3.8.4 {ECO:0000313|EMBL:CDM22780.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
Isovaleryl-CoA dehydrogenase n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KTN1_BORA1 rbh
SCNpilot_solid_1_scaffold_77_59
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70524..70958)
DNA (435bp) protein (145aa)
MerR-family transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMU7_PUSST
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family {ECO:0000313|EMBL:CDM22781.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
SCNpilot_solid_1_scaffold_77_60
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71062..72138
DNA (1077bp) protein (359aa)
Metallo-beta-lactamase family protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMU8_PUSST rbh
Zn-dependent hydrolases, including glyoxylases rbh
Zn-dependent hydrolases, including glyoxylases {ECO:0000313|EMBL:CDM22782.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so
Displaying items 31-60 of 100 in total

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