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SCNpilot_solid_1_scaffold_1_24

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 24308..24868

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HQ11_ACHXA similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 182.0
  • Bit_score: 302
  • Evalue 2.20e-79
Transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 182.0
  • Bit_score: 328
  • Evalue 1.10e-87
  • rbh
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930, ECO:0000313|EMBL:CDM24663.1}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1437824 species="Bacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 182.0
  • Bit_score: 328
  • Evalue 5.30e-87

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGAACAAGGCCTTCGTCAAGGAATCGGACGCGGACGAGGACGATGACCTGCCCGAGGCGCGGGCATTGCCCGCCGGCACGAAGAACTACATGACCACGGGTGGCTATCGCGCCCTGAACGATGAACTGATGCATCTGATGAACGTGGAGCGGCCCGACGTGGTGCAGACCGTGTCCTGGGCGGCGTCCAACGGCGACCGCTCCGAGAACGGCGACTACATCTACGGCAAGAAGCGCCTGCGGGAGATCGACCGCCGCATCCGCTTCCTGACAAAGCGCCTGGAATCGGCCGAGGTGGTCGATCCCTCGCAGCAGCCCAATCGCGACCAGGTGTTCTTTGGCGCCACCGTGCAGTATTGCGACAGCCAGGGCCGGGAATTCAACGTCACCATCGTCGGCGTGGACGAAGCCGATCCCCTGAACGGACGCATCAGCTGGGTCTCGCCGGTGGCGCGCGCCCTGATCAAGGCGCGCGAAGGCGATGTCGTGACCCTGCGCACCCCGGCCGGCATCGAGGAACTGGACATCCTGGCCGTCAGCTACCCGCCTGCCGCTGGCTGA
PROTEIN sequence
Length: 187
MNKAFVKESDADEDDDLPEARALPAGTKNYMTTGGYRALNDELMHLMNVERPDVVQTVSWAASNGDRSENGDYIYGKKRLREIDRRIRFLTKRLESAEVVDPSQQPNRDQVFFGATVQYCDSQGREFNVTIVGVDEADPLNGRISWVSPVARALIKAREGDVVTLRTPAGIEELDILAVSYPPAAG*