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SCNpilot_solid_1_scaffold_1_79

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(87402..88982)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I2I0_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 529.0
  • Bit_score: 862
  • Evalue 1.60e-247
virD4; type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 529.0
  • Bit_score: 862
  • Evalue 4.50e-248
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:CAP44062.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 529.0
  • Bit_score: 862
  • Evalue 2.20e-247

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1581
ATGTCTACCCTGCTCTCCCCTATCACGCGGCGGCGCATTGCCGCTGTGTCCCTCGCCGTCTTTCCGATCAGCGCCTGGATGACTGCCGCCACCTACGGCAGCGGCATGACCTGGCAGGACTGGGATGGCCGCACAGCCTGGCATTTCGTGAAACTGACACCAGGCTATCCGCTGCTGTACGGGGCGCTGGGCATCGGCCTGCTCGCCGCCCTGGCGTTGATCCTGTTCGTAGGCCGCACAGCGAAAACCGAAGGGTTTGAAGGTGCGGCGTACAAACGCTTTGTCCGGGGCACCCGCATGACCACAGCCAAACACCTGGCCAAGCTCTGCACCGAACCCGGTCAGCAACAGATCGACGTGGCAGGCATCCCGATGCCAACCGCCAATGAAAACCTGCATCTGCTGGTCAGCGGGGCCACCGGGTCGGGCAAATCCGTGCTGCTGCGCAATATGGCGGCCTCCGTGCAGGCCCGATCAACAAGCTCAGCCCGCAAACTGCTGCGCAATGACCGCATGATCGTCATTGATCCGAACGGCGACATGCTGAGCAAGTTCTGGCAACCCGGCGATGTGATCCTGAACCCGTATGACGCCCGCAGCGAAGGCTGGTCACTGTTCAACGAGGTGCGGGCCGACTACGACTGGAAGCACCTGGCGCGTTCCCTGGTCCCCATGAGCCAGGACAAAAACGCAGAGGAATGGAACGATTTTGGCCGTCTGCTGCTGCGCGAAACGGCGAAAAAGCTCTATCAGCTACAGGGCAAGAAAGCCCAGATCATGGATCTGTTTCGCCTCTGCACCATCGAAGATCCCAAGACCCTCAAGCAATTCCTGGAAGGCACACTGGCAGAGTCCCTGTTTGTCGGTTCCAGTGAGGCCAGCAAGGCGCTGTCCTCGGCCCGATTCGTACTGTCCAACAAGCTGTCGGAACACACCAGCATGAAGCCTGGCCCATTTTCCATCCGCGGCTGGCTGGATGATCCCCAGGCTGGCAACCTATATATCAACTGGCGCGAAGACATGATGCATGCCATGAAGCCGCTGGTATCGGCCTGGGTCGATGTGTTCATCACATCCATTCTGTCCATGCCCGAACACACCGACAGGCGCTGGTGGCTGTTCATTGACGAACTGGCCAGCCTCGAAGGCCTGCCGTCGCTGGAGGCCGGGCTGACGAAAGGCCGCAAGAATGGGCTGCGCATCATCGCCGGATTGCAGAGCACATCCCAACTGGAACACATCTACGGGCGCACCATGGCCACTACCCTGCGGGCCAGCTTCCGCAACCTGGCGGTCCTGGGCGGATCGCGCACCGATCCGCAGACAGCCCGCGACATGAGCGAAAGCCTGGGCAAACATGAAGTCGAGCGCCCGAAATTCAGTGTTAGCCGCAGTGTCGATCACCGCAACACCTCGGATAATATGGATCGGACGACTGAGGATGTGGTAACGGCAGCGCAGATTCAGGCACTGCCGGTGCTGGAGGGGTATGTGGCGATGGCGGGGGAGTTGCCGGTGGCTCGGGTGAAAATGCCGTATCGGCGATTTTTGAACAATTCTGAATCCTTTGTAGGGATCTAA
PROTEIN sequence
Length: 527
MSTLLSPITRRRIAAVSLAVFPISAWMTAATYGSGMTWQDWDGRTAWHFVKLTPGYPLLYGALGIGLLAALALILFVGRTAKTEGFEGAAYKRFVRGTRMTTAKHLAKLCTEPGQQQIDVAGIPMPTANENLHLLVSGATGSGKSVLLRNMAASVQARSTSSARKLLRNDRMIVIDPNGDMLSKFWQPGDVILNPYDARSEGWSLFNEVRADYDWKHLARSLVPMSQDKNAEEWNDFGRLLLRETAKKLYQLQGKKAQIMDLFRLCTIEDPKTLKQFLEGTLAESLFVGSSEASKALSSARFVLSNKLSEHTSMKPGPFSIRGWLDDPQAGNLYINWREDMMHAMKPLVSAWVDVFITSILSMPEHTDRRWWLFIDELASLEGLPSLEAGLTKGRKNGLRIIAGLQSTSQLEHIYGRTMATTLRASFRNLAVLGGSRTDPQTARDMSESLGKHEVERPKFSVSRSVDHRNTSDNMDRTTEDVVTAAQIQALPVLEGYVAMAGELPVARVKMPYRRFLNNSESFVGI*