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SCNpilot_solid_1_scaffold_1_487

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 492045..493643

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I2I0_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 532.0
  • Bit_score: 906
  • Evalue 9.60e-261
  • rbh
virD4; type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 532.0
  • Bit_score: 906
  • Evalue 2.70e-261
  • rbh
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:CAP44062.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 532.0
  • Bit_score: 906
  • Evalue 1.40e-260

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGTCTACCCTGATCTCCCCCATCACTCGGCGGCGTATCGCCGCCTTTTCTCTGACGCTCTTTCCCATCGGGGCCTGGATGACCGCTGCCACCTACGGTAGCGGCATCGCCTGGCGCGACTGGGATCGACAGATGGCCTGGCATTTCGTGAAGCTCACCCCTGGTTATCCCCTGCTCTACGGGGCGTTAGGCGTAGGCCTGGTGCTGGCCCTGGCCTTGATTCTCTTTGTCGGCCGCACCGCGAAAACCGAAGGTTTCGAGGGGGCCGCCTACAAGCGTTTCGTGCGCGGCACCCGCATGACCACGGCCAAACACCTGGCAAAGCTCTGCACAGAACCCGGCAAGCAGCAGATCGATGTAGCAGGCATCCCCATGCCCACAGCGAACGAAAACCTGCACCTGCTGGTGAGCGGTGCCACGGGGTCCGGCAAGTCGGTGCTGCTGCGCAATATGGCGGCGTCCGTGCTGGCGCGATCACGCACGCATCGTCACCACCTGACCGGCCAACCGCCCATGCGCAATGACCGCATGATCGTGATCGACCCCAACGGCGATCTGCTGAGCAAATTCTGGCAACCCGGCGACGTGATCCTCAACCCCTACGACGCCAGAAGCGAGGGCTGGTCCTTCTTCAACGAAGTCCGCGCCGACTACGACTGGAAGCGCCTGGCGCATTCCCTAGTGCCCATGAGCCAGGACAAGAACGCCGAGGAGTGGAACGACTTCGGGCGGCTGTTGCTGCGCGAAACCGCCAAGAAGCTGCACCAGCTGCAGGGGACGGACGCCAGCATCATGGATCTGTTTCGGCTGTGCACCATCGAGGATCCCAAGGTGTTGAAGCAATTCCTGGAAGGCACCCTGGCTGAATCCCTATTCGTCGGCTCCAGCGAAGCCACCAAAGCCCTGTCATCGGCCCGGTTTGTGCTCTCCAACAAGTTGTCGGAACACACCAGCATGAAGCCCGGCCCCTTCTCCATCCGTGACTGGCTGGACAGGCCGGGCGGCGGAAACCTGTACATCAACTGGCGCGAAGACATGATGAGCTCCATGCGGCCCCTGGTGTCGTCCTGGGCCGATGTCTTCATCACTTCGATTCTGTCCATGCCCGAAGGCACCGGCAGGCGCTGGTGGCTCTTCATCGACGAGTTGGCCAGCCTGGAAGCCTTGCCATCACTGGAAGCGGGGCTCACCAAAGGCCGCAAAAATGGGCTGCGCATCGTGGCTGGCCTGCAGAGCACATCCCAGCTGGAACACCTGTACGGCAGGACGATGGCCACCACCATCCGGGCGAGTTTCCGCAACCTGGTCGTGTTGGGCGGATCCCGTACCGACCCGCAGACCGCCCGCGACATGAGCGAAAGCCTTGGCAAACACGAGGTCGAGCGGCCAAAATACAGCGTCAGCCGCAGTGTCGATCATCGGAATACGTCCGATAATATGGATCGGACAGTTGAGGATGTGGTGACACCGGCGCAGATTCAGGCGCTGCCGGTGCTGGAGGGGTATGCGGCCCTGGCGGGGAATTTGCCGGTTGCGAGAGTCAGAATGCCATTTCAGGATTTTGGCAACCAGACAGCGGCATTTCGAGACGAAGAATGA
PROTEIN sequence
Length: 533
MSTLISPITRRRIAAFSLTLFPIGAWMTAATYGSGIAWRDWDRQMAWHFVKLTPGYPLLYGALGVGLVLALALILFVGRTAKTEGFEGAAYKRFVRGTRMTTAKHLAKLCTEPGKQQIDVAGIPMPTANENLHLLVSGATGSGKSVLLRNMAASVLARSRTHRHHLTGQPPMRNDRMIVIDPNGDLLSKFWQPGDVILNPYDARSEGWSFFNEVRADYDWKRLAHSLVPMSQDKNAEEWNDFGRLLLRETAKKLHQLQGTDASIMDLFRLCTIEDPKVLKQFLEGTLAESLFVGSSEATKALSSARFVLSNKLSEHTSMKPGPFSIRDWLDRPGGGNLYINWREDMMSSMRPLVSSWADVFITSILSMPEGTGRRWWLFIDELASLEALPSLEAGLTKGRKNGLRIVAGLQSTSQLEHLYGRTMATTIRASFRNLVVLGGSRTDPQTARDMSESLGKHEVERPKYSVSRSVDHRNTSDNMDRTVEDVVTPAQIQALPVLEGYAALAGNLPVARVRMPFQDFGNQTAAFRDEE*