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SCNpilot_solid_1_scaffold_4_2

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(315..1049)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WYP7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 243.0
  • Bit_score: 341
  • Evalue 7.40e-91
  • rbh
Predicted D-glucarate or D-galactorate regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 242.0
  • Bit_score: 411
  • Evalue 2.20e-112
  • rbh
Predicted D-glucarate or D-galactorate regulator, GntR family {ECO:0000313|EMBL:CDM23252.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Caste similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 242.0
  • Bit_score: 411
  • Evalue 1.10e-111

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGGCACCTGCTACCGTTCGGCGTTCTCGCAGCTTGACCCAGAATGTGGTGTCGTCGTTGTCCGAACGCATCCGCAATGGCGAATTCCATGTGGGAGAGAAGCTGCCGACGGAATCCGAATTGATGGAAGCCTTCGGCGTGAGCCGCACGGTCATCCGCGAGGCCATTTCCAGGCTGCAGGCCGCCGGTCTGGTGGAAACCCGACATGGCATCGGCACGTTCCTGCTGGAACCGCAGAACGAGCAGCAACTGCGCATCCGCACGGAAAACATCCTGACCATGCTGGACGTCATGGCGATCCTGGAATTGCGCATCAGCCTGGAAACCGAGGCCGCCGGCCTGGCCGCCCTGCGGCGCACCGATGCCCACATGCAGCAGCTGCGCGCGACGCTGGACGAATTCGCCGAGCACATCCGCAAGAAAACCGGCAATGCCGTGGTGTCGGACGTGGCCTTTCACCTGCTGGTGGCCACGGCGACCGGCAACCGCTATTTCCACGACATCCTGAAGCAGCTGGGGAAGGCGATCATTCCGCGCACCCGGGTGGATTCCGCCGCGCTGGCGGACGACGACCGCGTCCGCTATCTGGAACGCGTCCACCTCGAACACGAGGACATTTTCAACGCCATCGCCCGCAAGGACCCGGACGCCGCGCGGGCGGCCATGCGCACCCACCTGGCCAACAGCCGCGAACGGTTGCGCAAGGCTCAGGAAACCGTCGCCCGGAAGGGCTGA
PROTEIN sequence
Length: 245
MAPATVRRSRSLTQNVVSSLSERIRNGEFHVGEKLPTESELMEAFGVSRTVIREAISRLQAAGLVETRHGIGTFLLEPQNEQQLRIRTENILTMLDVMAILELRISLETEAAGLAALRRTDAHMQQLRATLDEFAEHIRKKTGNAVVSDVAFHLLVATATGNRYFHDILKQLGKAIIPRTRVDSAALADDDRVRYLERVHLEHEDIFNAIARKDPDAARAAMRTHLANSRERLRKAQETVARKG*