ggKbase home page

SCNpilot_solid_1_scaffold_4_13

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 12110..13189

Top 3 Functional Annotations

Value Algorithm Source
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00030F24ED similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 355.0
  • Bit_score: 485
  • Evalue 3.60e-134
  • rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 358.0
  • Bit_score: 574
  • Evalue 1.70e-161
  • rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:CDM23247.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 358.0
  • Bit_score: 574
  • Evalue 8.20e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGAATGATTCTTTCCAACAGCTGCGTCTGGATGGCGTCGGGCGGCAGTATCCCACCGCATCCGGTTCGACCGTCGCCGCCCTGAAGGATCTCAGCCTGGACATCCGGCGCGGCGAGTTCATCGCCCTGCTTGGGCCTTCGGGCTGCGGCAAATCGACCGCGCTGAATTGCCTGGCGGGGCTGGCCGACCTCAGTTCCGGCAGCATCTGGCTGGACGACACGCGCATCGACGTGCTGCCGCCCGAACGGCGCGGCTTCGGAATGGTCTTCCAGAACTATGCCCTGTTTCCCCACATGTCGGTCCGCGACAACGTCGGCTTCGGCCTGCGCATGCGCGGCGTGTCGAAGCAGGAAACGGCCCAGCGGGTCAAGGCTGCGCTGTCCCTGGTGCAGCTCGAAGGCCACGAATCCAAGCTGCCCGGCCAGCTCTCCGGCGGCCAGCAGCAGCGCGTGGCCATCGCCCGCGCCATCGTCATCGAACCGCCGGTCATCCTGATGGACGAGCCCCTGTCCAACCTGGATGCCAAGCTGCGCGTCGAAATGCGGGCGGAAATCCGCCGCATCCACCGCCAGCTGGAACGCGCCACCATCTACGTCACCCACGATCAGGACGAGGCCCTTTCCATGGCCGACCGCATCGTGGTCATGCGGGCGGGCAGCGTGCAGCAGGTCGGCACGCCCCGCGAAGTCTACGGCCAGCCCCACAATCTGCATGTCGCCCGGTTCATGGGCTATCGCAACGTGCTGGCCTTCCAGGTGATGCGCCACGAAGGCGAACACATCACCGTGCAGCAGGGCCAGGTCCAGCTGCAGGGCACTGCGATCTCGGTGCCCGCAGGCACCCGGACGGTCGCCGTCGCCATGCGGCCCGACGACTTCGAACTGGCCTCCGAAAATTCGGCCAACACTCTGGACGCGACGATTCAGCAGATCGAATTCGGCGGGCGCAGCTCCCTGCTGGTCGTCAACAGCCTCATCGGCGAACTTTTCGTGCGGGTCAGCGGCGACTTCCAGCCGGGCGACCAGGTGCGCCTGCACATCCCCGCCGACCGGGTGCTGACCTACGCGGAGGCCCTATGA
PROTEIN sequence
Length: 360
MNDSFQQLRLDGVGRQYPTASGSTVAALKDLSLDIRRGEFIALLGPSGCGKSTALNCLAGLADLSSGSIWLDDTRIDVLPPERRGFGMVFQNYALFPHMSVRDNVGFGLRMRGVSKQETAQRVKAALSLVQLEGHESKLPGQLSGGQQQRVAIARAIVIEPPVILMDEPLSNLDAKLRVEMRAEIRRIHRQLERATIYVTHDQDEALSMADRIVVMRAGSVQQVGTPREVYGQPHNLHVARFMGYRNVLAFQVMRHEGEHITVQQGQVQLQGTAISVPAGTRTVAVAMRPDDFELASENSANTLDATIQQIEFGGRSSLLVVNSLIGELFVRVSGDFQPGDQVRLHIPADRVLTYAEAL*