ggKbase home page

SCNpilot_solid_1_scaffold_11_148

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(158729..159421)

Top 3 Functional Annotations

Value Algorithm Source
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Herbaspirillum sp. CF444 RepID=J3D6K4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 222.0
  • Bit_score: 255
  • Evalue 3.90e-65
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJL85764.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobac similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 222.0
  • Bit_score: 255
  • Evalue 5.40e-65
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 223.0
  • Bit_score: 237
  • Evalue 4.00e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGATTTCTCGGTCATCTGGGACAACCTTCCCCTGCTTCAGAAGGGGTTCCTGTTCACGCTGGAGCTGTCCGCCATCGCGATCGCGGGCGGCTTCCTGATCGGCCTGGTCCTGGCGCTGGCCAGATATTCCCGCATCGCCGTCATCCGCATCGCGGCCGGGCTGTACGTGGACCTCATGCGGTCCGTGCCCCTGCTCCTGGCCTTGTTCTGGATCTTCTTCCTGGCGCCGCTGGCCCTGCAGTGGGCGACGGGCGCGGTGCGCCCCGTCAAGGTGGGCCCGGACAAGACCGCGATCATCGCCTTTATCCTGTTCGAAGCCGCCTATTACTGCGAAATCATCCGCTCGGGCATCAGTTCGGTGTCACCCGGCCAGTGGTCGGCCTCGCTGGCCCTGGGCATGTCCCGCCGCCAGATGATGGCGCTGATCGTGCTGCCGCAGGCCATCCGGAACATGGTGCCGGTATTCCTGACGCAGGCCATCATTCTTTTTCAGGACACGTCGCTGGTATACGTCATGTCCGTGACGGATCTCCTGGGCGCGGCGTCCATCATCGGGATCCGCGACGGGAACTTGGTCGAACCCTATCTGTTCGTGGCCCTGGTCTATCTCGCCATCAGCATCGTGCTCACGGCCGCCGTGCGCCGCTTTTCCAGGAAATCGGGCGCGCCGGCGCCCCATTTCGCCAGATAG
PROTEIN sequence
Length: 231
MDFSVIWDNLPLLQKGFLFTLELSAIAIAGGFLIGLVLALARYSRIAVIRIAAGLYVDLMRSVPLLLALFWIFFLAPLALQWATGAVRPVKVGPDKTAIIAFILFEAAYYCEIIRSGISSVSPGQWSASLALGMSRRQMMALIVLPQAIRNMVPVFLTQAIILFQDTSLVYVMSVTDLLGAASIIGIRDGNLVEPYLFVALVYLAISIVLTAAVRRFSRKSGAPAPHFAR*