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SCNpilot_solid_1_scaffold_11_150

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(160315..161223)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Herbaspirillum sp. CF444 RepID=J2U3R1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 292.0
  • Bit_score: 314
  • Evalue 1.60e-82
  • rbh
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL85762.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 292.0
  • Bit_score: 314
  • Evalue 2.20e-82
family 3 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 293.0
  • Bit_score: 286
  • Evalue 9.90e-75

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGAAAATCCATTCAATGATCCTGGGCGCCGCGCTGACGGTCTGCGCCTTTTCCGCTTATGCGGCCGACACATCGAACACCCTGCAGAAGATCAAGGACACCAAGGAGATCGTCCTGGGCTATCGCGAGGACGCCACGCCCTTCGCCTACATCGACAACAGCCAGACGCCGACCGGATTCTCGGTCGACCTGTGCCGGGAGATCGTCAAGGGGATCGAAAAGGCGCTGGGCATGCAGGATATCCGGATCACCTACCAGCCGGTCACCGCATCGAACCGCATTCCCCTGCTGGCCAACGGCTCGATCGATCTGGAATGCGGCTCGACCACCAACACGCAGGAACGGCAGAAGGCCGTGTCCTTTCTGTACACCACCTACGTGACCGGAACTAAAATCCTGGTCAGGACCGATTCGGGCATCAACAGCGTCGAAGACCTGAAGGGCAAGAAGATCGCGGTCACGGCGGGCACCAACAACATCCGCGCGGTGCAGAAGCTCAACGAGGAAAAGCACCTGAACCTCACCCTGGTCTACGGCGACAGTCACGCCGTCAATTTCCTGCAGCTGCAAAACGGCCGCGTGGACGGCTTCTCGACCGACGACATCCTGCTCTCCGTCCTGCGCGCCCAATCCAAGGCGCCCAAGGACTTCAAGCTCATCCCCGAACAGCTGCTGTCCGTGGAACCCTACGCCATCGGCGTGCGCAAGGACGACCCGAAATTCAAGGAGCTCGCCGACGGCATCCTGAAAACGGCCTTCGACGACGGAAAATTCACCGCCATCTACGAAAAATGGTTCATGAACCCGATACCGCCCAAGGGCATCAATCTCGACATGCCGATGTCGGGTGAATTGAAGCAGCTCATGCAGCACCCCAGCGATTCGACGAATCCGCAGCCACGGCAATAG
PROTEIN sequence
Length: 303
MKIHSMILGAALTVCAFSAYAADTSNTLQKIKDTKEIVLGYREDATPFAYIDNSQTPTGFSVDLCREIVKGIEKALGMQDIRITYQPVTASNRIPLLANGSIDLECGSTTNTQERQKAVSFLYTTYVTGTKILVRTDSGINSVEDLKGKKIAVTAGTNNIRAVQKLNEEKHLNLTLVYGDSHAVNFLQLQNGRVDGFSTDDILLSVLRAQSKAPKDFKLIPEQLLSVEPYAIGVRKDDPKFKELADGILKTAFDDGKFTAIYEKWFMNPIPPKGINLDMPMSGELKQLMQHPSDSTNPQPRQ*