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SCNpilot_solid_1_scaffold_11_233

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(255529..256062)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipoprotein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IGJ6_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 171.0
  • Bit_score: 231
  • Evalue 7.90e-58
Probable transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 174.0
  • Bit_score: 293
  • Evalue 3.60e-77
Probable transmembrane protein {ECO:0000313|EMBL:CDM23450.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellani similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 174.0
  • Bit_score: 293
  • Evalue 1.80e-76

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCGCAGCATTCCTTCCCCCTGTCCCGAACGCTTCTGGCCGGCGCGGCGGCCGGCGCCAGCCTGATGCTGGCGGGCTGCGCCAACATCGCGGCCACGCCGCCGGGCACCCCGCTGGCGCAGGTCGAGGCCCGGTTCGGCGCCCCGACCCTGCAATGCACCGACAGGCAGGGGCGCGAGCGCGCCGTCTGGTCGCAGCAGCCTTTCGGGCAGCACGCCTGGGGCGCCACGGTCGACGCCCAGGGCCGCGTCGGCCCGATCCAGCCCCTGTTGACCGACGAACACTTCCAGGTGCTGAAACAAGGCGTCTGGACGGCCGAGCAGGTGCGCTGCGAATTCGGCCCGCCCGCGATCATCGACACGGCCGGCCTGCCCAACGTGCGCCAGATCGTCTGGAGCTACCGCTACAAGCAGGACCACGTCTGGAATTCGCTGATGTACGTGTTCATGGGCCGCGACGGCGCCCAGGTGACGAAGTTCCACCCCGGGCCGGACCCGATGTACGACCAGGACAGCCAACTGCCCAGGATGTAG
PROTEIN sequence
Length: 178
MSQHSFPLSRTLLAGAAAGASLMLAGCANIAATPPGTPLAQVEARFGAPTLQCTDRQGRERAVWSQQPFGQHAWGATVDAQGRVGPIQPLLTDEHFQVLKQGVWTAEQVRCEFGPPAIIDTAGLPNVRQIVWSYRYKQDHVWNSLMYVFMGRDGAQVTKFHPGPDPMYDQDSQLPRM*