ggKbase home page
Advanced Search
Search Help

SCNpilot_solid_1_scaffold_11_241

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 265253..272257

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
RTX protein n=3 Tax=Aeromonas veronii RepID=F4DAV8_AERVB similarity UNIREF
DB: UNIREF100
  • Identity: 28.3
  • Coverage: 999.99
  • Bit_score: 494
  • Evalue 5.00e-136
  • rbh
T1SS secreted agglutinin (RTX similarity KEGG
DB: KEGG
  • Identity: 27.1
  • Coverage: 999.99
  • Bit_score: 504
  • Evalue 1.80e-139
Putative outer membrane adhesin like proteiin {ECO:0000313|EMBL:ABV36951.1}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 29.2
  • Coverage: 999.99
  • Bit_score: 480
  • Evalue 1.10e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shewanella sediminis → Shewanella → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 7005
ATGGCCACCGATACCGTCCTGATCTCTCACGTCACAGGCAAAGCCTGGATGCGCACTGCTGAGGGACAACTGATCGCCCTGCATGAAGGCATGCGAGTGCCTGTCAACGCCAGCATCCTGACGGACGAGGGGGCCTCGGTGATCCTGCAGGTCGACGGGGTGCCGGCCGTGATCCTTGGCCAGAACACCGACATGCTGGTGTCCGCCGACCTGGCTCAGGCCCAGCCCCAGCCGGCTGAACACGCCGTGGCTGTGCCGGCCGACCCCGTTGCCGACCAGGTCCTGGCTGCCCTGGATGCGGGGCAAGATCCGTTCGCTGTCCTGGATCCGACCGCGGCGGTGCTGACCGGCGGCGGTGGCGGCGGCGCCAGCTTCACGCGCCTGGCCAGCGTCACCGAAGCCGTGTCCCCTCTGGATCTGGCCTACCCGCGCCAGGGCGTGGAAACGCCGGAGTTCGTGCAACTGGGCGGTGCGGCGCCGACGCCGACAGCGGCGGACGTGCTGGCGCCGACGCCGGAACCGGCCGCTCCGACGATTAACGTCCCCGATGACAACGACAAGACTCTGGAAGGTCTGCCGGTGTTTGTGCCGGGCACCTTCACCATCAGCGAGGCCGATACGGCCGCGGGTGTGGAAGGGACGTTCACCTTCTCCGCTCCGGCCGCTCCGTCATCCCTGGAGTTCGTCTTCGCGGGCGAAACCGGCACGCCGGGCGGCGGCGCGCCCGCCGCCTCGTCCCTCACGGTCACCTTGGCCCAGCTTCAGGCGGCGACGCCGGGCAGTCCCATCGTGATCGACACGGATCGAGGCGTCCTGACTCTGACCGGCTACAACCCCGCCACGGGCACGGTCTCTTACCGTTATGTGTCCGATGGCTGGCAGGACCACACGGGCTCGGCCACGGATCCGTCCATCGGGCAATACCTGCCCGATTCCATCAGCATCACCGTGACCGACAGCCTCGGCCGTACCGCGACTGGCAGCATCGTGGCCGCCATCACGGATACGGATCCCGTGGCCCGGCCCGACACGGCCGCGGTCACGGAAGACACCGCTCCGCAGGCCGTGGGCAATGTCATCACGGGCACGGGGGTCGATGGACAGGATACGCTGGCGGCGGACCCCGCCCACGTGACGGCGATCCAGGCGCCTGGCGCGGCGGATGCCGCCCCCGTATCTGAAAGCGGCACGGTGACCGTGCAGGGCGCCTATGGCGACCTGACGATCGATGCGGACGGGAACTACACCTACACGCTGGCGGGCGAAGGCGACCCGCGCTTTGGGGCCGTGCAGGCACTGGGGGCGGACGCCCATCCCACGGAAGTCTTTACCTACACGCTGACCGACCAGGACGGCGATGTTGCCGCGACGACGCTGACGGTCACTGTCAATGGCACGAACGACGTGCCGACGATCACCTTCGGCGGCGACAACGGCGCCGACGCGAACGCGGCGGTGTCGGAAGAGGGCCTGAAGGCCGGCATCTGGCCGCCGCAGTTCCCCGGGATCCCGGATGGCGAAGGCGTTCCCGACACGACCGACAGCGCCAAGGACAGCGGCACGTTCACGGTCCACGACACGGACGCGGGCGACACGGTGACGGTGAAGCTGGGCGCGCCGTCCGATGTCCTGAGCTCGGCCGGCCAGACGGTGCATTGGGTGGTGTCGGCCGATGGCCAGACGCTGACCGGGCGCGTGGGCAGCGGGCTCTTTGCGCATGACGTGATCAAGATCTCCCTGCACGACAACGGCGGCGGGAACTACTCGTATGACGTGAAGCTGCTGGGGCCGGTCGATCACCCCGATGCGAGCATCGAGGATGCCCTGAACCTGGGCGTTCCCATCCTGGTCACGGACAGCCAGGGCGCGACGGCGACAGGCAACATCCTGACCGTGAACATCCAGGACGACAGCCCTCTGGCGGTCAACGATGACGGCGGCACGGTGACCGAGGACGCCCAGGGGCATGCTGCGGTCCTGATCGGTAATGTGCTGGTCAACGATGTTGCGGAAAGCGGCGCCTGGGGGGCGGACGGCCCGAAAGACGGAACCCACGGCTTTGCCTGGAACGCCGGCGACAATGCGGCGGCGCAGGCCGATCTGTCGCAGTACGGCACGCTGCATCTGGATGCCCTGGGGAACTGGAAGTTCACTCTGGACAACTCCCTGCCCGCCACGCAGGCGCTGGCCGAAGGCCAGACCAAGGACTTCGTCCTGAAATACACGCTGACCGACAACGACGGCGACACGTCGGAAGCCACGCTGACCATTCACATCAAGGGCGCCAACGACGCTCCCACGATCACTTTTGGCCAGGATGGCGGCCATGCGGCCGTCTCCGAGGAAGGCCTGACCGCAGCCGGTGGCAACTATGACAACGGCGTTCCCGGCCACGGGAACGACGTTCCCAGCGGCGACCAGACCAACGCGCCTTCGGCGTCCGGCTCGTTCACCATCGCGGACGTGGATGGGGATATGCCGACTGTGGCGTTGGGCGCGGGCGTGACGGCGGTCAGCCTGGACAACCCGGCCGGCGGCTCGACCACGCCGCAGGGTCTGACGTCGCATGGCGATCCCATTCAATGGGCCCCCAGCGCCGATGGCCATCATCTGATCGGCTACACCGGGACCGAGGGCGCGGACGACTACCGTGAGATCATCCAGATCGATCTGACGCCGGGCGCCGACGGGCATTATGACTATACGGTGACGCTGAAGGGCGCCATCGACCATCCGATCACGGAAGGCGCCGCCGAGGACGTGCTGAGCCTGAACGTTCCGATCGCGGTGGATGACGGCCACGGCGGCGTCACGAATTCCGCCATCACGGTGCGTGTCGAGGACGACAGCCCCTATGTCGGCACGCCCGACGCACAGGGCTCCGCCGGCCTGACCGGCATCCCCGACGTGTATGTCGGGACCGTGGACTTCACGGGTGATTCCGTCGGAACCTTGCTGGGCTTCAATGATGGCGCCATCAGGGTTACGGCCCAGGGTTTCTCGACATCAACGGATTCCACCTTGACGAGCGCCAATGTCCTCCAGACCGATAATGGCCTGGGTGTCATGAGCAATGGCGAACCCTATCTTCCTCTATCCGGCGAAGTCGATTTCCGGAACTTCGCGGATGGCAGCAGCGCTTCCGAAACCCTGACGGTCGCGCTGCAGGATGGCAAGGTCGCCTATAGCGCTCATGTGGAATTCTCCATGATGTTCGGCGGCGAACTGGAATCCGGCATGGTGGAATTCTGGCGGGGCGGCATCAAGGTCGGCCAGCAAGCCTTCAGTTCCGACGCCGGGTCCGGGGACTACGCGGCGGATTTCAACGCCGACAGCTTCGGCGGTTTCGATACGCTGGTGTTCCGGGCGACCAGCAACGGCAACACCAATTTCAGCGACAACAGCGATTTCGCCGTCAAGAGCATCACCTTCGGCGGTTCCGATCTGCCCCAGGCCCTGGCCTATGGCACGGGCCAGCTCGACTACCAGTACGGCGCCGATGGCGCGGGTGGCGTTCAATGGAACACGCCGGCGGCCGGCGCGATCTATGCCGACGGGCAGGAAGTCCAGTTCTCGTCCGAGGGCAAGGGCACCGTGCTGAACGGCATGGTCAATGGCGAACTGGCTTTTCAACTGATCCTGTCGCCCGCGACAGGGAAGTGGGAATTCTTCGAGTACAAACCCCTGACCGATGCGAACGGCGATCACCTGAATTCGCTGCCCGCTTCCTTCACGGTTACCGACGCTGACGGCGATCCCTCGGTCGGGCGGATCACCATCGGCCTGCCGGAGTTCAATCACGCGCCTGTCATTGTCGACGGCGAGACAGCCGTGTCCGAGGAAGGCTTGCCTCATGGCCTGCCGGACACGGCCGGCACGCCCACGGACACGGGCAACGAGCGGACGGCTTCCGGCACGCTGGCCATCACCGACCAGGATAGCGGTGACACGCATACGGTCACCCTGGTGAAGCCGGCGGATGATGCGTTGACCTCCCAAGGCAAGCCGGTCGTCTGGGCCCTGTCGGACAGCGATCACACCCTGATCGGCACGGTGGACGGCGTCACGGTGATCACCGTGACGATCACGGATGCCGGCGCCTACACCGTCACCTTGTCGGGCCAGATCGATCATCCGACGAAGGGCGTGGAAGATGTGCTGTCCCTGGGCATCGGCGTGCAGGTTTCCGATGGTCACGGCGGCGCCGACAGCGGCACCCTGACAGTCAACATCGAAGACGACAGCCCGGAATTCGGCCAAGTGACCGATGCCACCCTGCTCAATCAGGTGGGTGAAACGCTCGGCGATCTGGTCTTCCATACGGGAGCGGATGTCAACGGCGCGTCGCTGGACATCACCAAGATCGATGGCCTGCCCAAAGGCTACGAGGCGAAGATCAGCGACGATGGAAAGACAGCGGATATTTATCCTTCCGGACATTCGGGAACGCCGCTGTACACCGTGACCCTGAACGACAACGGCACCTACTCGGTTGATCAGCATTACGTGCTGGCAGGAACAGAGGTCCTGCCTCCTGCCGGAGGCTATGCCATCATCACCAACTCGCCGACGGATCACTACCAATGGGGGACTGATGTACAGGTGCGTGCCTTGGGTGGCGATACTCTGAATGCAAGTTCTGCGAACGGGTTTGGTATTAATAACGGCGGGCAGTTCCAGCAGGGCGAACAATTCCAGATCGCGTTCAAGGAACCCGTGTCCGAGTTCAGCCTGTCCGTAAAAAAGGTCTGGGATGCGGGCTCCGTCAAGGTCGATTTGTATAACGACGGCGAACTTGTCAAGACGCTCTATGTGGCTCTCGACAGCAGTCATTCCGTTCTCGGCATTACAAGCGGTCAACTGGGCGGGGTGGTGTTTGACCAGGTGAACGTGACGGGCCAGGGGAATATCAAGGTCGGGTTTGACAGCGACCTTCAGTACACCTCGGCTCATGTCGACGCTCCCGACTTCACCGTTCACGTCACCGGCACGGATGGCGACGGCGATTCCGTGACGACATCGTTCGATGTCGCGACCAAGGCCAACACGCCGCCTGAATTCCTCAGCGGCAGCGACACGAACGATACGCCGCCGAATCACGACACCTATGCCTTCACGGCTGCGGATCCGCATGACGGCACATCGGTTGTGGGCGAGGTGCAGGCGCACGACGTCGATGGCGATACCCTGAGCTACCAGATCACCAACGGCAACGGAGACGGCGCCTACAGCATCGATGCCGCGACCGGGGAAATCCAGGTCGACGGTTCGAAGATCGGCGATCTGTTCGGCAAGGAGCAGACCGACACGCTGACGGTGCAGGTCTCCGACGGCAAGGGCGGCACTGACATCGCGGCGGTGGACATCCATCTGGTCGGCGACAAGCTGGTGACCGGCACCAATGACCAGAACGTCCTGGCCGGGAATGTCGGCGACGACATCCTGCTGGGCGATCAGGGCGGGGCCAAGGTAACGGTCCAGCCAGGACAGAACTACAACATTGCATTGGTGGTGGATACGTCCGGTTCGATGAGCGATGACTCTGGAGAGACCAGACCGGTCTGGGTGGAGAGTAAGGAATGGCAATCGACGGGGTGGTGGCCGTGGCAAGGGCATTGGGTCGATACCAGCCATTACGAGGACCAACCGATTTCCCGTATGGAGCTCGTTCAGGACGCGCTGAAGAATCTGGCTACCCAGTTGGCGAACCACGATGGCAAGGTCAATGTGACCCTGATCGGATTCGCGGGTACGGCGACGGATGTCACGCCAAGCCATGGGCAGTCGGGTTATGTGTTCAAGGATCTTGATGCCACGAAGCTCGCTGCGTTGATCGACAAGATCGACGATCTGACGGCTGATGGTGCGACAAACTACGAAGACGCTTTCAAGCAGGCGGGGGACTGGTTCCAGTCACTGCCGTCCGATGGCAGCTACAAGGACCTGACCTTCTTCCTGACCGACGGGAATCCCACGACCCATATCGGCGAAGGGGGCGGCAGCTATACGAACTATGGCGACGTGGCCAACGCCTTGGACGACTTTCAGCAGGTCGCCGGCTACGGCGAGGTCCATGCCATCGGCATCGGTGCCGGGATCAACGAGAGCATCCTGAAGTTTTTCGACAATACGAGCACCACCGGATCGCAATGGGTGCAACTCGAGGATGGCAGCTGGGTCCATGCCGAAGCCGGCCAGGTCGACATCGTCAACGATGCCGACGGCCTGAATGCCGCTTTGCAGGGCGGCGGACCGGACAGCATCGATCCGCTGCCCGTCAGCAACGACACCCTGTCGGGCGGCGACGGCAACGACATCCTGTTCGGCGACGCCATCAACACCGATGGCCTGACCTGGGCGGGGCGCCCGGACAATCTTCCAGACGGCTCGGGCCTGGATGCCTTGAAGGCCTACCTGAAGGTCGATCTGGGCCACGATGCCTCGAATCAGGACATCTACGACTACATCAAGGGCCATTCCGATCAGTTCAACGTCGCGGGCGATGAGCGGGGCGGGAATGACACCCTGGATGGCGGGGCCGGGAACGACACCCTGTACGGCCAGGGCGGCAACGATACGCTGATCGGCGGGGCAGGCAACGACACGCTGTATGGCGGCGCCGGCGACGACGTCTTTGTCTGGAAGCTGGGCGACCAGGCTGCGGCGGGCCAACCCGCGGCGGTGGATCATGTGATGGACTTCGGCGTGGATGCCGCCGGCGCCAATGGCAAGGATCTTCTGGATCTTAGCGATCTGCTCAAGGGCCATGCCGACGGCGCCACGCCGGGCGATCATGGTGACCTGACGCAGTACCTGCACATCAGCGGTGACGGCAGCAAGACCGTCATCGACGTGAAGGTCAACGCGGACGGTACGGCAGCCGATCATGTGACTCAGCAGATCGTCATCGACAACGTCGACCTGACGATCGGCCATGGCAGCGATCAAACGGCTCTCATCAACAGCCTGATCAACGATGGCAAGCTGAAGGTCGATCCCAGCTAA
PROTEIN sequence
Length: 2335
MATDTVLISHVTGKAWMRTAEGQLIALHEGMRVPVNASILTDEGASVILQVDGVPAVILGQNTDMLVSADLAQAQPQPAEHAVAVPADPVADQVLAALDAGQDPFAVLDPTAAVLTGGGGGGASFTRLASVTEAVSPLDLAYPRQGVETPEFVQLGGAAPTPTAADVLAPTPEPAAPTINVPDDNDKTLEGLPVFVPGTFTISEADTAAGVEGTFTFSAPAAPSSLEFVFAGETGTPGGGAPAASSLTVTLAQLQAATPGSPIVIDTDRGVLTLTGYNPATGTVSYRYVSDGWQDHTGSATDPSIGQYLPDSISITVTDSLGRTATGSIVAAITDTDPVARPDTAAVTEDTAPQAVGNVITGTGVDGQDTLAADPAHVTAIQAPGAADAAPVSESGTVTVQGAYGDLTIDADGNYTYTLAGEGDPRFGAVQALGADAHPTEVFTYTLTDQDGDVAATTLTVTVNGTNDVPTITFGGDNGADANAAVSEEGLKAGIWPPQFPGIPDGEGVPDTTDSAKDSGTFTVHDTDAGDTVTVKLGAPSDVLSSAGQTVHWVVSADGQTLTGRVGSGLFAHDVIKISLHDNGGGNYSYDVKLLGPVDHPDASIEDALNLGVPILVTDSQGATATGNILTVNIQDDSPLAVNDDGGTVTEDAQGHAAVLIGNVLVNDVAESGAWGADGPKDGTHGFAWNAGDNAAAQADLSQYGTLHLDALGNWKFTLDNSLPATQALAEGQTKDFVLKYTLTDNDGDTSEATLTIHIKGANDAPTITFGQDGGHAAVSEEGLTAAGGNYDNGVPGHGNDVPSGDQTNAPSASGSFTIADVDGDMPTVALGAGVTAVSLDNPAGGSTTPQGLTSHGDPIQWAPSADGHHLIGYTGTEGADDYREIIQIDLTPGADGHYDYTVTLKGAIDHPITEGAAEDVLSLNVPIAVDDGHGGVTNSAITVRVEDDSPYVGTPDAQGSAGLTGIPDVYVGTVDFTGDSVGTLLGFNDGAIRVTAQGFSTSTDSTLTSANVLQTDNGLGVMSNGEPYLPLSGEVDFRNFADGSSASETLTVALQDGKVAYSAHVEFSMMFGGELESGMVEFWRGGIKVGQQAFSSDAGSGDYAADFNADSFGGFDTLVFRATSNGNTNFSDNSDFAVKSITFGGSDLPQALAYGTGQLDYQYGADGAGGVQWNTPAAGAIYADGQEVQFSSEGKGTVLNGMVNGELAFQLILSPATGKWEFFEYKPLTDANGDHLNSLPASFTVTDADGDPSVGRITIGLPEFNHAPVIVDGETAVSEEGLPHGLPDTAGTPTDTGNERTASGTLAITDQDSGDTHTVTLVKPADDALTSQGKPVVWALSDSDHTLIGTVDGVTVITVTITDAGAYTVTLSGQIDHPTKGVEDVLSLGIGVQVSDGHGGADSGTLTVNIEDDSPEFGQVTDATLLNQVGETLGDLVFHTGADVNGASLDITKIDGLPKGYEAKISDDGKTADIYPSGHSGTPLYTVTLNDNGTYSVDQHYVLAGTEVLPPAGGYAIITNSPTDHYQWGTDVQVRALGGDTLNASSANGFGINNGGQFQQGEQFQIAFKEPVSEFSLSVKKVWDAGSVKVDLYNDGELVKTLYVALDSSHSVLGITSGQLGGVVFDQVNVTGQGNIKVGFDSDLQYTSAHVDAPDFTVHVTGTDGDGDSVTTSFDVATKANTPPEFLSGSDTNDTPPNHDTYAFTAADPHDGTSVVGEVQAHDVDGDTLSYQITNGNGDGAYSIDAATGEIQVDGSKIGDLFGKEQTDTLTVQVSDGKGGTDIAAVDIHLVGDKLVTGTNDQNVLAGNVGDDILLGDQGGAKVTVQPGQNYNIALVVDTSGSMSDDSGETRPVWVESKEWQSTGWWPWQGHWVDTSHYEDQPISRMELVQDALKNLATQLANHDGKVNVTLIGFAGTATDVTPSHGQSGYVFKDLDATKLAALIDKIDDLTADGATNYEDAFKQAGDWFQSLPSDGSYKDLTFFLTDGNPTTHIGEGGGSYTNYGDVANALDDFQQVAGYGEVHAIGIGAGINESILKFFDNTSTTGSQWVQLEDGSWVHAEAGQVDIVNDADGLNAALQGGGPDSIDPLPVSNDTLSGGDGNDILFGDAINTDGLTWAGRPDNLPDGSGLDALKAYLKVDLGHDASNQDIYDYIKGHSDQFNVAGDERGGNDTLDGGAGNDTLYGQGGNDTLIGGAGNDTLYGGAGDDVFVWKLGDQAAAGQPAAVDHVMDFGVDAAGANGKDLLDLSDLLKGHADGATPGDHGDLTQYLHISGDGSKTVIDVKVNADGTAADHVTQQIVIDNVDLTIGHGSDQTALINSLINDGKLKVDPS*