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SCNpilot_solid_1_scaffold_11_30

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(26824..27777)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudomonas agarici RepID=UPI000303DD1D similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 306.0
  • Bit_score: 367
  • Evalue 1.30e-98
  • rbh
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 306.0
  • Bit_score: 513
  • Evalue 5.20e-143
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDM25618.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 306.0
  • Bit_score: 513
  • Evalue 2.60e-142

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGAACCTGAGGCAACTCAATTACTTCACGCGCATCGTCGAAACCCAGAACATGACCCGGGCGGCCGAAATGCTGCACATCGCGCAGCCCGCGCTCAGCCAGCAGGTCACATCGCTGGAGGAAGAGCTGGGAGTCAAGCTGCTGAACCGCACGGCCCGGGGCATGCTGGCGACGGAGGAAGGCGAACTGCTGTACCAGCATGCCCGCGCCATCCTGCGGCAGGTCGACAACACGCGGGCGCTGATATCCCGCAAGCAAGGCCTCATCTCCGGCACGGTCTCCATCGGCATGGCGTCCAGCACCGCGAAGATGCTGGCCCTGCGCCTGATCGACCTGCTCAGGGAACGCCATCCCGCCATCGTGCTGGAAATCGTGGACGTTCCCAGCGCCGACCTGACCTCCATGGTGATGCAGGGCCGGGTCGATTTCGCCCTGGCCCCCGACCCGAAAAAGCCCAAGGGCATGCGCTGCGAGCCGCTGCTGATCGAAGACCTGTACCTGTTCACCCATCCCTCGCTGCGCCAGGACAGCGGCCCCGTTTCCCTGGAAGAAATGGCCCTGCATCCGCTGGTCCTGCCCAGCCTGCCCAACACGCTGCGATCGCGGATCGAACACGCCTTTCTGCAAAGGCACCTGCCCTACCACCTGCTGGCCGAGGCCAGCACGTCCGCCATCCTGATCCCCGCCGTCAAGGCCGGGATCGCCACCACCGTCCTGCCCTACTCCGCGGGCCACGAGGAAGTGCAGCTCGGCAGCATCGCCATGCACCCCCTGGCCTTCGAGCTGTCGCGGGAAATCTGCCTGTGCGTCAGCGAAACGCTGCCCGTCTCCGTGGCCACGCGCGAAGCCCTCGGGCTGTGCAGGCGACTGGCCAGGGACCTGGTGATCCAGGGGATCTGGCAGGGCTGCCGCGTCATCGGCCAATCCGGCGCACACCAGATCCCGGCCGGCTGA
PROTEIN sequence
Length: 318
MNLRQLNYFTRIVETQNMTRAAEMLHIAQPALSQQVTSLEEELGVKLLNRTARGMLATEEGELLYQHARAILRQVDNTRALISRKQGLISGTVSIGMASSTAKMLALRLIDLLRERHPAIVLEIVDVPSADLTSMVMQGRVDFALAPDPKKPKGMRCEPLLIEDLYLFTHPSLRQDSGPVSLEEMALHPLVLPSLPNTLRSRIEHAFLQRHLPYHLLAEASTSAILIPAVKAGIATTVLPYSAGHEEVQLGSIAMHPLAFELSREICLCVSETLPVSVATREALGLCRRLARDLVIQGIWQGCRVIGQSGAHQIPAG*