ggKbase home page

SCNpilot_solid_1_scaffold_52_4

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 5404..7653

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2H9S8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 755.0
  • Bit_score: 1028
  • Evalue 0.0
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:CDM22864.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 751.0
  • Bit_score: 1191
  • Evalue 0.0
Lipid A export ATP-binding/permease protein MsbA similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 751.0
  • Bit_score: 1191
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2250
ATGCAGGATCCCATTCTCGAATCCTCGGCGGCGGCCGCCTGCCCGCCCGGCCTGCCCGCCGCATGGCACGACACGCTCTCGGCCCAACTGGCGGCGGACGAGCATCCGCTGGAATGGCTGCCGCTGAACCTGGATGGCCAACTGCAGTACGCCGACAGCCTGCTGGTCCTAACCGACCGCCGCTGGCTGTTCTGCGGCGCCGACGCGCAGTCCTGCCGGTCCTGGCCGCTGCGCCCCGACCTGCACCTGAAACTGCAGGATCACGCCGGCGTGGGCAGCCTGGAGCTGGTGGACGAACACGCCCGCCTGGCGCGCTGGCGCTACACGATGGACAGCCATCCCCAGGCGCTGCGGCTGCTGGCCCGCCACGAATCCCTGCGCCAGCCATCGGACGACGCGCCGCCCGCGCCCGCCGCGGACATCGCCGCCAAGGACACGCAGCCGCCCCGCGCCAGTTCGCTGTTTCGCCTGTGGCGCTTCGCCCGCCCCTACCGCCGGCAACTGGGCATCGGCCTGGTCCTGACGCTGATTTCCACCGGCGCATCGCTGGTGCCGCCGTACCTGACCATGCCGCTGATGGACGACGTGCTGATCCCCTTCCAGAACGGCGAGCCGATCCACTGGAACCTGGTGACGCTGTATCTGGGCGGGCTGCTGGCCTCATCCCTGGTCGCCTGGGCCCTGGGCTGGGGGCGCAGCGCCATCCTGGCCTGGGTCAGCGAGCGCATCGGCGCCGATCTGCGCACCAGCACCTACCAGCACCTGCAGCAGCTGTCGCTGCAGTATTTCGGCGGCAAGCGCACGGGCGACCTGATGGCCCGCATCGGCTCGGAATCCGACCGCATCTGCCTGTTCCTGTCGCTGCACCTGCTGGATTTCTTCACCGACATCCTGATGATCGTCATGACGGCGGCCATCCTGCTGTCCATCGATCCCTGGCTCGCGCTGGCGACCCTGGCGCCCCTGCCCATCATCCTGTGGATGATCCACTGGGTGCGCGACCGGCTGCGCCACGGCTTCGAAAAGGCCGACCGCGTCTGGTCGGAAATCACCAACGTGCTGGCCGACACCATCCCCGGCATCCGCGTGGTCAAGGCCTTCGCCCAGGAAAAGCGCGAAGTCGCGCGTTTCCGCGAGGCCAACGACCGCAACCTGGCGATCAACGACCGGGTCAATGCGCTGTGGTCGCTGTTCACGCCCACCGTCACCCTGCTGACGGAGCTGGGCCTGCTGGTGGTCTGGGTGTTCGGCATCTGGCTGGTGTCGCGCCAGGCCATCACGGTCGGGGTCCTGACGGCGTTCCTGGCCTACATCAGCCGGTTCTACGTGCGCCTGGATTCCATGAGCCGCATCGTGTCCGTGACCCAGCGGGCCGCAGCCGGCGCGAAGCGCATCTTCGACATCCTGGACCACGTGTCCAGCGTGCCGGAACCCGCCGAGCCCCGCCCCATGAACCAGATCCGGGGGCGCATCGAACTGAGCCGGATCGGTTTCCGCTATGGCAACCGCAGCGTGATCCAGGACCTGAGCCTGGACATCGCCCCCGGCGAAATGGTCGGCCTGGTGGGCCACAGCGGCTCGGGCAAGAGCACGCTGGTCAACCTGATCTGCCGCTTCTACGACGTGTCCCAGGGCGCCATCCGCCTGGACGGCATCGACATCCGCCAGTACGCGATCAGCGACTACCGGCGCCACATCGGCCTGGTGCTGCAGGAACCCTTCCTGTTCTACGGCAGCGTGGCCGAGAACATCGCCTACGGCCGCCCCGACGCCAGCCGCGCGGACATCATCGCGGCCGCCCGCGCCGCGCACGCGCACGAATTCATCCTGCGCCTGCCGCACGGCTACGATTCGCTGGTGGGCGAGCGGGGCCAGGCCCTGTCGGGGGGCGAGCGCCAGCGCATCTCCATCGCCCGGGCCATCCTGATCGATCCGCCGATCCTGATCCTGGACGAGGCGACCTCGTCGGTGGACACGGCGACCGAAAATGAAATCCAGAAGGCCCTGGACAACCTGGTCAAGGGCCGCACCACGATTTCCATCGCCCACCGCCTGAGCACGCTGCGCGAGGCCGACCGCCTGGTGGTGATGGACAGCGGCCGCATCGTCGAGATCGGCCGCCACGACGAACTGCTGGCCCGCGAAGGCGCCTATGCGCGCCTGTACCAGGCCCAGCTGCAGGGCGCGCTGCCGCCGTCGCGCGCAACCGGGCACTCCGCCCACGAGGCCGATGATGATTCCGATTCCTGA
PROTEIN sequence
Length: 750
MQDPILESSAAAACPPGLPAAWHDTLSAQLAADEHPLEWLPLNLDGQLQYADSLLVLTDRRWLFCGADAQSCRSWPLRPDLHLKLQDHAGVGSLELVDEHARLARWRYTMDSHPQALRLLARHESLRQPSDDAPPAPAADIAAKDTQPPRASSLFRLWRFARPYRRQLGIGLVLTLISTGASLVPPYLTMPLMDDVLIPFQNGEPIHWNLVTLYLGGLLASSLVAWALGWGRSAILAWVSERIGADLRTSTYQHLQQLSLQYFGGKRTGDLMARIGSESDRICLFLSLHLLDFFTDILMIVMTAAILLSIDPWLALATLAPLPIILWMIHWVRDRLRHGFEKADRVWSEITNVLADTIPGIRVVKAFAQEKREVARFREANDRNLAINDRVNALWSLFTPTVTLLTELGLLVVWVFGIWLVSRQAITVGVLTAFLAYISRFYVRLDSMSRIVSVTQRAAAGAKRIFDILDHVSSVPEPAEPRPMNQIRGRIELSRIGFRYGNRSVIQDLSLDIAPGEMVGLVGHSGSGKSTLVNLICRFYDVSQGAIRLDGIDIRQYAISDYRRHIGLVLQEPFLFYGSVAENIAYGRPDASRADIIAAARAAHAHEFILRLPHGYDSLVGERGQALSGGERQRISIARAILIDPPILILDEATSSVDTATENEIQKALDNLVKGRTTISIAHRLSTLREADRLVVMDSGRIVEIGRHDELLAREGAYARLYQAQLQGALPPSRATGHSAHEADDDSDS*