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SCNpilot_solid_1_scaffold_328_4

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 3936..4376

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=39 Tax=Bordetella RepID=F4LAZ6_BORPC similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 149.0
  • Bit_score: 245
  • Evalue 3.30e-62
C4-type zinc finger protein, DksA/TraR family similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 125.0
  • Bit_score: 248
  • Evalue 1.40e-63
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 125.0
  • Bit_score: 248
  • Evalue 7.20e-63

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGGCTAGCAAATCCGGCTCCAAATCGACGGCCAAGGCCCTGACCGAAAAAGAACTGTTGGCGATGCCCGAACAGGACTACATGAACGACGCCCAGCTCGCCTTCTTCCGGGATCGCCTGCACCAGCTCGAACATGAAATCCTGACCAACGCGGGCGCCACCACGGAAAACCTGCGGGAAACCCAATACGTCCCGGATCCGGCCGACCGGGCCACGATCGAGGAAGAACACGCGCTGGAACTGCGCACCCGCGACCGCGAGCGCAAGCTGCTGAAAAAGGTCCAGCAGGCCATCGCCCGCATCGACGCCGGGGAATACGGCTGGTGCGAGGAAACCGGCGAACCCATCGGCATTCCGCGCCTGCTGGCGCGCCCCACGGCCACGCTGTCCCTGGAAGCCCAGGAACGCCGCGAAATGCGCCAGAAGCTCTACGGCGACTGA
PROTEIN sequence
Length: 147
MASKSGSKSTAKALTEKELLAMPEQDYMNDAQLAFFRDRLHQLEHEILTNAGATTENLRETQYVPDPADRATIEEEHALELRTRDRERKLLKKVQQAIARIDAGEYGWCEETGEPIGIPRLLARPTATLSLEAQERREMRQKLYGD*