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SCNpilot_solid_1_scaffold_328_43

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(39368..40273)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GWA4_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 293.0
  • Bit_score: 451
  • Evalue 4.80e-124
  • rbh
RNA polymerase sigma factor RpoH similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 301.0
  • Bit_score: 502
  • Evalue 8.80e-140
  • rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961, ECO:0000313|EMBL:CDM22876.1}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1437824 species="Bacteria; Prot similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 301.0
  • Bit_score: 502
  • Evalue 4.40e-139

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGAGCCACACTTCGTCTTCCCTGGTGTTGGCGCCGGCCCAGCTCGCGCAGGCCATATCCAACCCGGGCGCCCTGGGCACCATCGATGCCTACATCGGGGCGGTCAATCGCATGCCCATGCTGACGGCCGAACAGGAATCCAGCCTGGGCCGCAGGCTGCGCGACGACAACGATCTGGAAGCCGCCCGCGAACTGGTCCTGTCCCACCTGCGGCTGGTCGTGTCCGTCGCCCGTCAGTACCTGGGCTATGGTCTGGCGCACGCCGACCTGATCCAGGAAGGCAATATCGGCCTGATGAAGGCCGTGCGCCGTTTCGACCCCGATCGGGGGGTGCGTCTGGTGTCCTTCGCGGTGCACTGGATCCGCGCCGAAATCCATGAATACGTGGTGCGCAACTGGCGCCTGGTGAAGATCGCCACCACCAAGGCCCAGCGCAAACTGTTTTTCAACCTGCGGCGCATGCGTCCGGACGGCCACACTCTGGCGCCGGACCAAGTGTCAGACATCGCCCGCGAACTCGACGTGCGTCCCGAAGACGTCTCCGAAATGGAAGTCCGCCTGTCGGGCGGGGATTGCGCCCTGGATGCGCCGGCCGACGACGAAGACCGCTACGCCCCGATCGCGTGGCTGGCCGACGACAGCCAGGAACCGGCCCAGGTGCTGGCGCGCCGCAGCATGGATGCCCTGCAGAGCCAGGGCCTGGCCGACGCCCTGGACACGCTGGACGACCGTTCGCGGCATATCGTGCAGGCCCGCTGGCTGGCCGACGATGGCGGCGCGACCCTGCACGAACTGGCGGCGGAATACGGCATTTCGGCCGAACGCGTCCGCCAGATCGAAGCCGCCGCGCTGAAGAAGCTGAAAACCGCCCTGGCGGATCGGCAGCCGGACTTCATGGCCGCCTGA
PROTEIN sequence
Length: 302
MSHTSSSLVLAPAQLAQAISNPGALGTIDAYIGAVNRMPMLTAEQESSLGRRLRDDNDLEAARELVLSHLRLVVSVARQYLGYGLAHADLIQEGNIGLMKAVRRFDPDRGVRLVSFAVHWIRAEIHEYVVRNWRLVKIATTKAQRKLFFNLRRMRPDGHTLAPDQVSDIARELDVRPEDVSEMEVRLSGGDCALDAPADDEDRYAPIAWLADDSQEPAQVLARRSMDALQSQGLADALDTLDDRSRHIVQARWLADDGGATLHELAAEYGISAERVRQIEAAALKKLKTALADRQPDFMAA*