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SCNpilot_solid_1_scaffold_77_10

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(10617..11552)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PPE7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 311.0
  • Bit_score: 453
  • Evalue 1.70e-124
  • rbh
Transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 302.0
  • Bit_score: 564
  • Evalue 1.90e-158
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDM22722.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 302.0
  • Bit_score: 564
  • Evalue 9.60e-158

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGGACACCCACCTGCTGCGCATCCTGCAGATCCTGCTGACCGAACAGAGCGTGTCGCGCGCCGCGATCAAGCTGGGCCTTTCCCAGCCCGCGCTCAGCAATTCGCTGCGGCGGCTGCGCGACATCACCGGCGACCCGATCCTGGTGCGCAGCAAGACCGGCATGGTCGCCACCGAACGCGGCCAGGAACTGCTGGCCCATGCCAACGAAGCGCTGTCCGCCATCGAGCGCATCACCCAGCCTCCCGGAGAATTCGATCCGGCCCATTCGACGCGCGAATTCCACCTGGGCGCCCCCGACTACCTGGATGCGATGTTCCTGCCGAACATCGCCGAAATCCTGCGCCGCGAAGCGCCCCATGCCAAATTCATCGTACACCCGATCAATGCCGATTACGACTACGCCGGCGGCCTGGAGGACGGCGGTCTGGACGTGGTGATCGGCAACTGGCTGGAACCGCCGCCCCAGATGCACATGGCGCGGCTGTTCGACGACGAAGTCGTCTGCATGGTGGGCAGCCAGAACCCCATCGCGCACCGGGAACTGAGCCTGAAGCAGTATCTGGAACTGCCCCACCTGGCGCCCTTTCCCTACGTCTCCGAACGGCAGAGCTTCATCGACGGCTATCTGGCCGCCCAGGGCCTGCGGCGCAACATCCAGATGACCATCCCCTATTTCGGCCAGGTCGCGGGCATGCTGCTGCGCACCGACCTGGTCTTCACCACGGGGCGGCAGTTCGCCCAGCACTACGCCCGCTATCTGCCCATCACCATCCTGCCCTCGCCCTTCCCCTTCCCGGCCATGCGCTTCTACCTGCTGTGGCACCGCCGCTGCCACGGCGCGGCCGAAGTCATCTGGCTGCGCCAGTGCATCGTCCGGGTCGCGTCCATGCTGCAGGCCAGCCTGGGCGCGCAGGGGTCCGCGACACCGTCCTGA
PROTEIN sequence
Length: 312
MDTHLLRILQILLTEQSVSRAAIKLGLSQPALSNSLRRLRDITGDPILVRSKTGMVATERGQELLAHANEALSAIERITQPPGEFDPAHSTREFHLGAPDYLDAMFLPNIAEILRREAPHAKFIVHPINADYDYAGGLEDGGLDVVIGNWLEPPPQMHMARLFDDEVVCMVGSQNPIAHRELSLKQYLELPHLAPFPYVSERQSFIDGYLAAQGLRRNIQMTIPYFGQVAGMLLRTDLVFTTGRQFAQHYARYLPITILPSPFPFPAMRFYLLWHRRCHGAAEVIWLRQCIVRVASMLQASLGAQGSATPS*