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SCNpilot_solid_1_scaffold_97_27

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 37108..38301

Top 3 Functional Annotations

Value Algorithm Source
Capsular polysaccharide export protein n=2 Tax=Bordetella bronchiseptica RepID=K0MI83_BORBM similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 396.0
  • Bit_score: 428
  • Evalue 7.50e-117
  • rbh
wcbO; capsular polysaccharide export protein similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 396.0
  • Bit_score: 428
  • Evalue 2.10e-117
Capsule polysaccharide biosynthesis protein {ECO:0000313|EMBL:KDD53234.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="B similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 396.0
  • Bit_score: 428
  • Evalue 1.10e-116

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGCGCCGCACGTTTTTATTCTTGCAGGGGCCCTGCTCGCCCTTTTTCCGTGAGCTGGCGTGCGCGTTGCGCCAGGCCGGCCATGCGGTCCGCCGCGTGAATTTCACGGCGGGCGATGCGCTGTATTGGCGGCTGGGCGGTTCGGTATCGTTTCGCGGGCGGGGGGCGCAGTTGCCGGCGTTCTATCGGCGATGGATCGGCCAATGGCGGGTGACCGACGTAGTGCTGTTCGGCGACTGCCGGCCGGTGCATCGGCCGGCGATTGCGCTGGCCCGTTTGCTGGGCCTGCGGGTGCATGTTTTCGAGGAAGGCTATTTCCGCCCGCATCGCATCACGCTGGAGCGGGGCGGGGTGAATGCGCATTCACCCTTGATGCCGGTGCTGCGGCGGGACGCGGCGCCGGATTTCGAGCCTCCCGGCGAACCGACCGCCTTCAAGTCGCCCTTCTGGCGTCGGGCCGCGCACGATGTGGCCTACCACGTGGCGGGCGCGGCGAATCCGGTTCTGTTTCCGTTCTATCGCAATCACGCCCGCTACGTTGCGCCGTTGGAGTACCTGGGCTATGCGTGGCGTCTGCCGGCGCTGCGCTGGCATCGATCACGGGATGACCGGGTGTTGAAAGCCCTGTTGCTGCAGCGCAGACGGTTTTTCGTGCTGCCCCTGCAGCTGGATGGCGACAGCCAGATTCGCCGGCATTCGCCTTTCGGCAATATGCGGGAATTGATGCAGGGCGTGCTGGATTCTTTTGCGCGGCATGCGCCGACCGATGCGGCGCTGGTGGTGAAGAATCATCCGCTGGATCCGGGATTGGCGCGCCATGGGCGGGTGTTGCGGCGCATGGCGCGTCGGTCCGGCCTGGAAGACCGCGTGTTTTACATGGAAACCGGGCAGTTGCCCCGATTGCTGCGCCGGGCCGCCGGGGTGGTGACGGTCAACAGCACGGTGGGCTCGCTGGCGCTGGAAGCCGGTCTGCCACTGATGGTGCTGGGGCGCGCGCTGTATGCCCAGCCAGGCCTGGTGCATGATGGGGATCTGGACAGTTTCTGGACTGCGGGCTTGCCGCCGGATGCGCAGCGTTTTCGTCGCCTGCGTCAGCGAGTGCTGGCGCAGGCGACGGTGAATGGCGGTTTCTACTGCCCGATGGGGATCGCACTGGCGGTGCAGAACAGTCTGCCGCGCTTGCTGGAAGACTGA
PROTEIN sequence
Length: 398
MRRTFLFLQGPCSPFFRELACALRQAGHAVRRVNFTAGDALYWRLGGSVSFRGRGAQLPAFYRRWIGQWRVTDVVLFGDCRPVHRPAIALARLLGLRVHVFEEGYFRPHRITLERGGVNAHSPLMPVLRRDAAPDFEPPGEPTAFKSPFWRRAAHDVAYHVAGAANPVLFPFYRNHARYVAPLEYLGYAWRLPALRWHRSRDDRVLKALLLQRRRFFVLPLQLDGDSQIRRHSPFGNMRELMQGVLDSFARHAPTDAALVVKNHPLDPGLARHGRVLRRMARRSGLEDRVFYMETGQLPRLLRRAAGVVTVNSTVGSLALEAGLPLMVLGRALYAQPGLVHDGDLDSFWTAGLPPDAQRFRRLRQRVLAQATVNGGFYCPMGIALAVQNSLPRLLED*