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SCNpilot_solid_1_scaffold_97_42

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(59907..61163)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:CDM24086.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:M similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 418.0
  • Bit_score: 792
  • Evalue 3.80e-226
Transcription termination factor Rho n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IJX7_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 418.0
  • Bit_score: 780
  • Evalue 1.10e-222
Transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 418.0
  • Bit_score: 792
  • Evalue 7.70e-227

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCACCTGAACGAACTCAAAGCGCTGCACGTGTCGCAGCTGCTGGAAATGGCTGCCGAACTCGACATCGACAACGCCAACCGGCTGCGCAAGCAGGAACTGATGTTTGCCATCATGAAACGGCGCGCCAAGCAGGGCGAACAGATCTTCGGCGACGGGGTCCTGGAAGTCCTGCCCGACGGGTTCGGCTTTCTGCGTTCGCCCGACACGTCCTACCTGGCCAGCACCGACGACATCTACATCTCGCCGTCGCAGATCCGCCGCTTCAACCTGCATACGGGCGATTCGATCGAAGGCGAGGTCCGCGTCCCGAAGGACGGCGAACGCTACTTCGCGCTGGTCAAGGTCGACAAGGTCAACGACGTCGCGCCGGAAGCCATCAAGCACCGGATCATGTTCGAGAACCTGACGCCGCTGCACCCCGACGAGCCGATGGTGCTGGAACGCGACATCAAGAGCAAGGAAAACATCACCGGGCGCATCCTGGACATCTTCGCGCCGATCGGCAAGGGCCAGCGCGCGCTGGTCGTCGCCAGCCCGAAGTCCGGCAAGACCGTGATCATGCAGCACATCGCGCATGCCATCACCACCAACTATCCCGACGCCGTCATGATCGTGCTGCTGGTCGACGAGCGCCCTGAAGAAGTCACGGAAATGCAGCGCACCGTGCGCGGCGAAGTCGTGGCCTCGACCTTCGACGAGCCCGCCACCCGCCACGTGCAGGTCGCCGAGATGGTGATCGAAAAGGCCAAGCGCCTGGTCGAACTGAAAAAGGACGTGGTGATCCTGCTGGACTCCATCACCCGCCTGGCGCGCGCCTACAACACGGTGGTGCCGGCTTCCGGCAAGGTCCTGACCGGCGGCGTGGACGCCAACGCCCTGCAGCGCCCGAAGCGCTTTTTCGGCGCCGCCCGCAACCTGGAAGAAGGCGGCTCGCTCACCATCATCGGCACGGCCCTGATCGAGACCGGCAGCCGCATGGACGAAGTCATTTACGAAGAATTCAAGGGCACCGGGAATTCCGAAGTGCACCTGGAACGGCGATTGGCCGAAAAGCGCATCTATCCGGCCATCAATCTGAACAAATCCGGCACGCGTCGCGAAGAGCTCCTGATCAAGCCCGAACTTTTACAAAAGGTCTGGGTCTTGCGCAAATTCATCCATGACATGGATGAGATCGATGCCATGGAATTCATCCTGGACAAAATCCGGGCCACCAAAAACAACGCCGAATTTTTTGACATGATGAAGAAATAA
PROTEIN sequence
Length: 419
MHLNELKALHVSQLLEMAAELDIDNANRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPDGFGFLRSPDTSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRVPKDGERYFALVKVDKVNDVAPEAIKHRIMFENLTPLHPDEPMVLERDIKSKENITGRILDIFAPIGKGQRALVVASPKSGKTVIMQHIAHAITTNYPDAVMIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHVQVAEMVIEKAKRLVELKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRFFGAARNLEEGGSLTIIGTALIETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRIYPAINLNKSGTRREELLIKPELLQKVWVLRKFIHDMDEIDAMEFILDKIRATKNNAEFFDMMKK*