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SCNpilot_solid_1_scaffold_531_7

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 5631..6140

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00035DD475 similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 169.0
  • Bit_score: 182
  • Evalue 3.10e-43
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 169.0
  • Bit_score: 231
  • Evalue 2.10e-58
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter {ECO:0000313|EMBL:CDM22619.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 169.0
  • Bit_score: 231
  • Evalue 1.10e-57

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
TTGAACGGGATTATCGAACGCTTCACCAGGTTTCTGCAGTGCCTGATCGCCATCATGCTGATGATCATGGTGGTCCTCGTGTTCGGGAACGTCGTGCTGCGATACGGCTTCAACTCGGGGATCATCGTCTCCGAGGAAGTCTCCCGCATGCTGTTCATCTGGGTGACCTTCCTGGGCAGCGTGGTCGCCATGCGCGAAAACGCCCACCTGGGGTCGAACTTCATCGTCAACGCGATGGGGCCCGCCGGGCGGCGCATCAGCTTGCTCGTCGGCCGGCTGATCATGCTCTATCTGTGCTGGATGATCTTCCGCGGCGCCCTGACCCAGACCGAAATCAACCTGTCCGTGCCCGCCCCCATCACCGGCATGTCGATGGGCGTGTTCTATTCCAGCGGCATCGTGTTCAGCGCGCTGGGCGCGCTGATCCTGCTGTGCGACCTGGTCAGGCTCGCCACGGCGCCCGCCGGGGACGTGGACCGGTTCCTGGACAACTCCGGAGAACAGGCATGA
PROTEIN sequence
Length: 170
LNGIIERFTRFLQCLIAIMLMIMVVLVFGNVVLRYGFNSGIIVSEEVSRMLFIWVTFLGSVVAMRENAHLGSNFIVNAMGPAGRRISLLVGRLIMLYLCWMIFRGALTQTEINLSVPAPITGMSMGVFYSSGIVFSALGALILLCDLVRLATAPAGDVDRFLDNSGEQA*